RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 P4HA3Q7Z4N8 544 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 SPAG16Q8N0X2 631 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 CENPSQ8N2Z9 138 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 OTUD6BQ8N6M0 293 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 FADS6Q8N9I5 356 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 OR4F17Q8NGA8 305 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 SLC5A11Q8WWX8 675 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 LHX4Q969G2 390 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 RAB7BQ96AH8 199 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 VSTM2LQ96N03 204 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 OR4F4Q96R69 305 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 FAM173AQ9BQD7 235 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TPPP3Q9BW30 176 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF416Q9BWM5 594 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 JPT2Q9H910 190 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 WDR76Q9H967 626 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 FANCFQ9NPI8 374 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 AGPAT5Q9NUQ2 364 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 TAS2R16Q9NYV7 291 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 MLXQ9UH92 298 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 CPQQ9Y646 472 aa3.66□□□□□ -1.82
C11orf88-204ENST00000529661 UBXN8O00124 270 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 AP3B1O00203 1094 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 E2F3O00716 465 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 SDC3O75056 442 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 IDH1O75874 414 aaKnown RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ANXA4P09525 319 aaPredicted RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 THRBP10828 461 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 PPP2R1BP30154 601 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 RFC2P35250 354 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 SOX6P35712 828 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ETV5P41161 510 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 HTR5AP47898 357 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 SLC7A2P52569 658 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 GSTO1P78417 241 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ACY1Q03154 408 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF85Q03923 595 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 PAX8Q06710 450 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 OVGP1Q12889 678 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 BNIP1Q12981 228 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 TRIP10Q15642 601 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 TCTEX1D4Q5JR98 221 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 BEND6Q5SZJ8 279 aaPredicted RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 SULT1C3Q6IMI6 304 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 PRR5LQ6MZQ0 368 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF343Q6P1L6 599 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 EMBQ6PCB8 327 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CBLN3Q6UW01 205 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 APOOLQ6UXV4 268 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 GPRIN3Q6ZVF9 776 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 Q7L0L9 218 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ARMCX2Q7L311 632 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CATSPER3Q86XQ3 398 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 GRAMD2AQ8IUY3 354 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CENPLQ8N0S6 344 aaPredicted RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ABHD12Q8N2K0 398 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CSNK1G2-AS1Q8NCQ2 148 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 STKLD1Q8NE28 680 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 BEST4Q8NFU0 473 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 OR2T34Q8NGX1 318 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 OR52J3Q8NH60 311 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 FLVCR1-AS1Q8TAF5 88 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CNDP1Q96KN2 507 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 TCHPQ9BT92 498 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 RNF41Q9H4P4 317 aaPredicted RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 PANK3Q9H999 370 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 CENPMQ9NSP4 180 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 COX16Q9P0S2 106 aa3.65□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF346Q9UL40 294 aaKnown RBP3.65□□□□□ -1.83
C11orf88-204ENST00000529661 KDRP35968 1356 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 CCDC7Q96M83 1385 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 IGHV3-16A0A0C4DH30 117 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 WASHC1A8K0Z3 465 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 TMEM110-MUSTN1A8MSY1 372 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.64□□□□□ -1.83
C11orf88-204ENST00000529661 MAPK13O15264 365 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 TSC22D2O75157 780 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 MFN2O95140 757 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 CHRNA1P02708 482 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 GSTT2P0CG29 244 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 GSTT2BP0CG30 244 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 UQCRBP14927 111 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 CYLC1P35663 651 aaPredicted RBP3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ACTR1AP61163 376 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 IL9RQ01113 521 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 MRPL28Q13084 256 aaKnown RBP3.64□□□□□ -1.83
C11orf88-204ENST00000529661 C17orf58Q2M2W7 97 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 NCR3LG1Q68D85 454 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ASPHD2Q6ICH7 369 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ARMCX5Q6P1M9 558 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 RFWD3Q6PCD5 774 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 TMEM184AQ6ZMB5 413 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ADAMTSL5Q6ZMM2 481 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 CENPUQ71F23 418 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 OR10T2Q8NGX3 314 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ART4Q93070 314 aa3.64□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF597Q96LX8 424 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms