RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 THAP10Q9P2Z0 257 aaPredicted RBP16.77■□□□□ 0.27
IKBKB-228ENST00000523517 CHST2Q9Y4C5 530 aa16.77■□□□□ 0.27
IKBKB-228ENST00000523517 MUC22E2RYF6 1773 aaPredicted RBP16.76■□□□□ 0.27
IKBKB-228ENST00000523517 TRDV1A0A1B0GX56 115 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 MID1O15344 667 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 CCNYL3P0C7X3 344 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 GNSP15586 552 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 MPIP34949 423 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 SLC1A3P43003 542 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 CAV3P56539 151 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 SPRED2Q7Z698 418 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 VWA5B2Q8N398 1253 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 POGLUT1Q8NBL1 392 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 OR9A2Q8NGT5 310 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 OR4Q3Q8NH05 313 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 DMRTB1Q96MA1 342 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 ANKRD19PQ9H560 264 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 C11orf49Q9H6J7 331 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 POLMQ9NP87 494 aaPredicted RBP16.76■□□□□ 0.27
IKBKB-228ENST00000523517 LIPT1Q9Y234 373 aa16.76■□□□□ 0.27
IKBKB-228ENST00000523517 LALBAP00709 142 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 SSTR4P31391 388 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 SOX18P35713 384 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 AHRP35869 848 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 TRIM23P36406 574 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 RAB8AP61006 207 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 AADACL4Q5VUY2 407 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 OR52E1Q8NGJ3 308 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 OSTF1Q92882 214 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 RFKQ969G6 155 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 ASB16Q96NS5 453 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 GIMAP4Q9NUV9 329 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 CALML5Q9NZT1 146 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 PLEKHM1Q9Y4G2 1056 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 B4DXG7 233 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 CASKO14936 926 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 PLA2G10O15496 165 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 PRICKLE3O43900 615 aaPredicted RBP16.75■□□□□ 0.27
IKBKB-228ENST00000523517 CH25HO95992 272 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 POU2F2P09086 479 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 IFNA8P32881 189 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 STAT5AP42229 794 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 AVPR1BP47901 424 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 PPP3R1P63098 170 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 ABATP80404 500 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 HOXC5Q00444 222 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 SLC30A6Q6NXT4 461 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 FBXL6Q8N531 539 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 OR2L3Q8NG85 312 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 OR4F15Q8NGB8 312 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF681Q96N22 645 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 COMMD3Q9UBI1 195 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 CLCA2Q9UQC9 943 aa16.75■□□□□ 0.27
IKBKB-228ENST00000523517 MKI67P46013 3256 aaKnown RBP16.75■□□□□ 0.27
IKBKB-228ENST00000523517 OR52A4PA6NMU1 304 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 SURF4O15260 269 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 PROM1O43490 865 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 PAK4O96013 591 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 FPR3P25089 353 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ARFIP1P53367 373 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 MRPS15P82914 257 aaKnown RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 MADCAM1Q13477 382 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 FGL2Q14314 439 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 C16orf62Q7Z3J2 963 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 NKAIN4Q8IVV8 208 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ATP6V1C2Q8NEY4 427 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ACOT11Q8WXI4 607 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 SMARCD2Q92925 531 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 DEPDC7Q96QD5 511 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 TIMM29Q9BSF4 260 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 SYNPO2LQ9H987 977 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 PHPT1Q9NRX4 125 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 NTNG1Q9Y2I2 539 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ZIC2O95409 532 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 MYL9P24844 172 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 PRKAR1BP31321 381 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF155Q12901 538 aaPredicted RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 DSG2Q14126 1118 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 AGERQ15109 404 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 PDGFRLQ15198 375 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 DECR1Q16698 335 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 TMEM44Q2T9K0 475 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 SRFBP1Q8NEF9 429 aaKnown RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 SLC7A6Q92536 515 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 TEX12Q9BXU0 123 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 BTBD1Q9H0C5 482 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 KLHL28Q9NXS3 571 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 APOBEC3BQ9UH17 382 aaKnown RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 NDRG2Q9UN36 371 aaKnown RBP16.74■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF232Q9UNY5 417 aa16.74■□□□□ 0.27
IKBKB-228ENST00000523517 NINQ8N4C6 2090 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 CSF2P04141 144 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 APEX1P27695 318 aaKnown RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 TEAD1P28347 426 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 KIR2DL3P43628 341 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 CEBPEQ15744 281 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 CST6Q15828 149 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 LCN1P1Q5VSP4 162 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms