RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 HSPBAP1Q96EW2 488 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 ZBED6CLQ96FA7 236 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF764Q96H86 408 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 WDYHV1Q96HA8 205 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SGCZQ96LD1 299 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 FOPNLQ96NB1 174 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SERPINB12Q96P63 405 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 ZIM3Q96PE6 472 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 PANX3Q96QZ0 392 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 EBNA1BP2Q99848 306 aaKnown RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 AMBRA1Q9C0C7 1298 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SPNS1Q9H2V7 528 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 RHBGQ9H310 441 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 CDC42EP4Q9H3Q1 356 aaKnown RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 MS4A5Q9H3V2 200 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 TMBIM4Q9HC24 238 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 PNO1Q9NRX1 252 aaKnown RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 MOCS1Q9NZB8 636 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 NINJ2Q9NZG7 142 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 PACSIN3Q9UKS6 424 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 DTX4Q9Y2E6 619 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 MALRD1Q5VYJ5 2156 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 ALPK2Q86TB3 2170 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 NOTCH1P46531 2555 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 GOLGA8KD6RF30 607 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 F8W8V4 182 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ERN1O75460 977 aaKnown RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 TNFSF13O75888 250 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 LRATO95237 230 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 P04436 131 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 JUNP05412 331 aaKnown RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 APRTP07741 180 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 SMIM10L1P0DMW3 83 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 RPS3P23396 243 aaKnown RBP eCLIP5.99□□□□□ -1.452e-6■■■□□ 16
SDCBP-210ENST00000522843 CCND1P24385 295 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ATP5DP30049 168 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ACVR1BP36896 505 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 CPA2P48052 419 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 VPS41P49754 854 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 GPX6P59796 221 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 RAB8AP61006 207 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 TBPL1P62380 186 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF844Q08AG5 666 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 PIN1Q13526 163 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 KLHL38Q2WGJ6 581 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 FASTKD1Q53R41 847 aaKnown RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 UBAP2Q5T6F2 1119 aaKnown RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 HECTD2Q5U5R9 776 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 PRAMEF20Q5VT98 475 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 STEAP4Q687X5 459 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 NXNQ6DKJ4 435 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 C3orf62Q6ZUJ4 267 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF550Q7Z398 422 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 CMTM4Q8IZR5 234 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 RIBC1Q8N443 379 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF441Q8N8Z8 693 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 GSDMBQ8TAX9 411 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 UTP15Q8TED0 518 aaKnown RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 PAQR8Q8TEZ7 354 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 PYROXD1Q8WU10 500 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 PTPMT1Q8WUK0 201 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-210ENST00000522843 TMEM171Q8WVE6 324 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 SMIM10Q96HG1 83 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 CCDC77Q9BR77 488 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 SFXN3Q9BWM7 321 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 UGT2B28Q9BY64 529 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 ANGPTL4Q9BY76 406 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 UBQLN3Q9H347 655 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 KLHL31Q9H511 634 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 LRRC40Q9H9A6 602 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 LRTM1Q9HBL6 345 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 QPCTLQ9NXS2 382 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 NDRG3Q9UGV2 375 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 LGALS13Q9UHV8 139 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 RIMKLBQ9ULI2 386 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 CAMK2AQ9UQM7 478 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 SLC6A5Q9Y345 797 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 NBEAL2Q6ZNJ1 2754 aa5.99□□□□□ -1.45
SDCBP-210ENST00000522843 A0A087WUV0 522 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 HMGB1P1B2RPK0 211 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 KPNA5O15131 536 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CD3EAPO15446 510 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 NDUFS4O43181 175 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 NDUFS7O75251 213 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 TRIM3O75382 744 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 RCBTB2O95199 551 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 IGHV4-39P01824 125 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 SLC35G6P0C7Q6 338 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 MYZAPP0CAP1 466 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 GAAP10253 952 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CDH1P12830 882 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 RNH1P13489 461 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CD40P25942 277 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 HSD17B2P37059 387 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 SKIV2L2P42285 1042 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 SLC18A1P54219 525 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 BASP1P80723 227 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PDIA2Q13087 525 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 RUNX2Q13950 521 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms