RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CTPS2Q9NRF8 586 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 IMPAD1Q9NX62 359 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF226Q9NYT6 803 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 REV1Q9UBZ9 1251 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF232Q9UNY5 417 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 IGHV1OR21-1A0A087WYE8 117 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 FITM1A5D6W6 292 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 FRS3O43559 492 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 CTNSO60931 367 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 COQ9O75208 318 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 TRMUO75648 421 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 CBX7O95931 251 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 MAP3K8P41279 467 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 CTSKP43235 329 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 AVPR1BP47901 424 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 TAS2R41P59536 307 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 CDC42P60953 191 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 TARDBPQ13148 414 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■□ 25.6
TRAPPC9-210ENST00000521667 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 SLC35F3Q8IY50 421 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 NLGN4XQ8N0W4 816 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 CLIP4Q8N3C7 705 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 C12orf43Q96C57 262 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 DOK1Q99704 481 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 RHNO1Q9BSD3 238 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 PCDHGA10Q9Y5H3 936 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 A0A0C4DFX4 3053 aa17.22■□□□□ 0.35
TRAPPC9-210ENST00000521667 HRO43593 1189 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 RGS10O43665 173 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 STX11O75558 287 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 AK1P00568 194 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GABRB1P18505 474 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 EMX1Q04741 257 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 STX4Q12846 297 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 DUSP8Q13202 625 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ERI1Q8IV48 349 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCDC103Q8IW40 242 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GALNT12Q8IXK2 581 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 MORN4Q8NDC4 146 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 OR4K5Q8NGD3 323 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 OR52R1Q8NGF1 315 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GPR151Q8TDV0 419 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZFAND2BQ8WV99 257 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 PIK3R3Q92569 461 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 MMABQ96EY8 250 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 SPRTNQ9H040 489 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 PRTFDC1Q9NRG1 225 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 PLCXD1Q9NUJ7 323 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CACNA1IQ9P0X4 2223 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCDC163A0A0D9SF12 145 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 AGAP5A6NIR3 686 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 TGFBR3LH3BV60 316 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CLDN4O14493 209 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CDC123O75794 336 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 THBS1P07996 1170 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GLB1P16278 677 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 POU1F1P28069 291 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 HOXA6P31267 233 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 RGS8P57771 180 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 IGLV3-21P80748 117 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ILKQ13418 452 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GRM7Q14831 915 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 GPR68Q15743 365 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 SYT16Q17RD7 645 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 TMEM236Q5W0B7 351 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF836Q6ZNA1 936 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CARFQ8N187 725 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 POLR2J3Q9H1A7 115 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 LIN28AQ9H9Z2 209 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 TMEM9Q9P0T7 183 aa17.21■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCDC88CQ9P219 2028 aa17.21■□□□□ 0.34
TRAPPC9-210ENST00000521667 SPAG17Q6Q759 2223 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 DUX1O43812 170 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CCNYL3P0C7X3 344 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 GIMD1P0DJR0 217 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 IFNA8P32881 189 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 EMP3P54852 163 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 EIPR1Q53HC9 387 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 LYSMD4Q5XG99 296 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 PRSS48Q7RTY5 328 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 FAR1Q8WVX9 515 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 DIO2Q92813 273 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 HOXB13Q92826 284 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 RIT1Q92963 219 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 SLC38A4Q969I6 547 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 RBM18Q96H35 190 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ELF4Q99607 663 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CPSF4LA6NMK7 179 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 ZNF99A8MXY4 864 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 H0YIG0 161 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 H3BMQ9 156 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 AP3D1O14617 1153 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 CYP7B1O75881 506 aa17.2■□□□□ 0.34
TRAPPC9-210ENST00000521667 NKX2-2O95096 273 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms