RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 NR1D2Q14995 579 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 SMN1Q16637 294 aaKnown RBP14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 CCNJQ5T5M9 372 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 PODNL1Q6PEZ8 512 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 WDR5BQ86VZ2 330 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 CLIP4Q8N3C7 705 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 METTL27Q8N6F8 245 aaPredicted RBP14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 Q8N9G6 341 aaPredicted RBP14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 NODALQ96S42 347 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 TUBA1CQ9BQE3 449 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 UCK2Q9BZX2 261 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 ZNF350Q9GZX5 532 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 DUSP21Q9H596 190 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 SATB2Q9UPW6 733 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 IFT52Q9Y366 437 aa14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 TMEM184BQ9Y519 407 aaPredicted RBP14.4□□□□□ -0.1
THUMPD3-210ENST00000515662 FRS3O43559 492 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 OR10H3O60404 316 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 CDC123O75794 336 aaPredicted RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 GNSP15586 552 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 S1PR1P21453 382 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 HSD11B2P80365 405 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 STX4Q12846 297 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 ERV3-1Q14264 604 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 DCST2Q5T1A1 773 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PGBD2Q6P3X8 592 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 ZBTB46Q86UZ6 589 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PLXDC1Q8IUK5 500 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PEX5LQ8IYB4 626 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 COX18Q8N8Q8 333 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 OR52R1Q8NGF1 315 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PIK3R3Q92569 461 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 HOXB13Q92826 284 aaPredicted RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PRMT8Q9NR22 394 aaPredicted RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PRTFDC1Q9NRG1 225 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 RHBDL2Q9NX52 303 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 TMEM9Q9P0T7 183 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 FTSJ1Q9UET6 329 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF443Q9Y2A4 671 aaPredicted RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 TPRKBQ9Y3C4 175 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 LAMA1P25391 3075 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PCDH15Q96QU1 1955 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 H3BMH7 237 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 CLDN4O14493 209 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 TPST2O60704 377 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 CSF2RBP32927 897 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 TTKP33981 857 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 KRT20P35900 424 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 SEPHS1P49903 392 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 BTG2P78543 158 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 GPLD1P80108 840 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PTGES3Q15185 160 aaKnown RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PMS2CLQ68D20 193 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 GALNT12Q8IXK2 581 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 GPR151Q8TDV0 419 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 ISOC1Q96CN7 298 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 HSPBAP1Q96EW2 488 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 PRR14Q9BWN1 585 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 NAA50Q9GZZ1 169 aaKnown RBP14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 KLHL28Q9NXS3 571 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 SCN3BQ9NY72 215 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 REV1Q9UBZ9 1251 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 CLDN16Q9Y5I7 305 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 NINQ8N4C6 2090 aa14.39□□□□□ -0.11
THUMPD3-210ENST00000515662 AGAP5A6NIR3 686 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 H0YIG0 161 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 STX11O75558 287 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 CHMP24386 653 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 CD1CP29017 333 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 SLC35A2P78381 396 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 PRPF38BQ5VTL8 546 aaKnown RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 NLGN4XQ8N0W4 816 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 OR51Q1Q8NH59 317 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 RHOXF1Q8NHV9 184 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 RIT1Q92963 219 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 DGCR6LQ9BY27 220 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ALOXE3Q9BYJ1 711 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 SAP130Q9H0E3 1048 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 CACYBPQ9HB71 228 aaKnown RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ENAMQ9NRM1 1142 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 SEMA5BQ9P283 1151 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ERVK-18Q9QC07 812 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF232Q9UNY5 417 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 SNX5Q9Y5X3 404 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZAR1LA6NP61 321 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 COQ9O75208 318 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 OR2B3O76000 313 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 THBS1P07996 1170 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 OSMP13725 252 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 GABRA3P34903 492 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 IDH2P48735 452 aaKnown RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ARL4DP49703 201 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 CRISP1P54107 249 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 UGT2B15P54855 530 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF155Q12901 538 aaPredicted RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 GPR68Q15743 365 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF836Q6ZNA1 936 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ERI1Q8IV48 349 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms