RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 SF3B4Q15427 424 aaKnown RBP eCLIP12.06□□□□□ -0.48
DDX41-210ENST00000509576 ZNF572Q7Z3I7 529 aaPredicted RBP12.06□□□□□ -0.48
DDX41-210ENST00000509576 CCDC91Q7Z6B0 441 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 MILR1Q7Z6M3 343 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 GRAMD2AQ8IUY3 354 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 OR2M3Q8NG83 312 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 ATP6V1E2Q96A05 226 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 APIPQ96GX9 242 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 SFXN2Q96NB2 322 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 C1QTNF3Q9BXJ4 246 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 ACPTQ9BZG2 426 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
DDX41-210ENST00000509576 FOLH1BQ9HBA9 442 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 UTS2RQ9UKP6 389 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 DLGAP4Q9Y2H0 992 aa12.06□□□□□ -0.48
DDX41-210ENST00000509576 MRPS18CQ9Y3D5 142 aaKnown RBP12.06□□□□□ -0.48
DDX41-210ENST00000509576 YLPM1P49750 1951 aaKnown RBP12.05□□□□□ -0.48
DDX41-210ENST00000509576 GOLGA6L10A6NI86 522 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 MANBAO00462 879 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 FADS1O60427 444 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 CDH16O75309 829 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 PLAUP00749 431 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 CHMP24386 653 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 DPP4P27487 766 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 PCSK6P29122 969 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 ECHS1P30084 290 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 UGT2B10P36537 528 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 MC3RP41968 323 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 SIRPAP78324 504 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 IFT88Q13099 833 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 UNC50Q53HI1 259 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 ANKRD34AQ69YU3 496 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
DDX41-210ENST00000509576 ENPP6Q6UWR7 440 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 APOOLQ6UXV4 268 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 PAGE2Q7Z2X7 111 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 UBQLNLQ8IYU4 475 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 LRRC75A-AS1Q8N1F1 130 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 DCAKDQ8WVC6 231 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 SELENOMQ8WWX9 145 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 PIK3IP1Q96FE7 263 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 PIP5K1AQ99755 562 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 LRRC1Q9BTT6 524 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 DSN1Q9H410 356 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 BRF2Q9HAW0 419 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
DDX41-210ENST00000509576 ZNF337Q9Y3M9 751 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 ABCA1O95477 2261 aa12.05□□□□□ -0.48
DDX41-210ENST00000509576 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 SMAD7O15105 426 aaKnown RBP12.04□□□□□ -0.48
DDX41-210ENST00000509576 SCO2O43819 266 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX41-210ENST00000509576 AQP8O94778 261 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 GCAP28676 217 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
DDX41-210ENST00000509576 HSD17B3P37058 310 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 CD79BP40259 229 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 SLC6A8P48029 635 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 CAV1Q03135 178 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 ACKR1Q16570 336 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 KLC3Q6P597 504 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 LARP4Q71RC2 724 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX41-210ENST00000509576 YTHDF3Q7Z739 585 aaKnown RBP12.04□□□□□ -0.48
DDX41-210ENST00000509576 CDYL2Q8N8U2 506 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 CNEP1R1Q8N9A8 125 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 FNDC9Q8TBE3 224 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 EXOSC8Q96B26 276 aaKnown RBP12.04□□□□□ -0.48
DDX41-210ENST00000509576 PERPQ96FX8 193 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 PGM2Q96G03 612 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 KCNA7Q96RP8 456 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 CDC42EP4Q9H3Q1 356 aaKnown RBP12.04□□□□□ -0.48
DDX41-210ENST00000509576 ELOVL6Q9H5J4 265 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 RNF122Q9H9V4 155 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 UBTD1Q9HAC8 227 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 MED11Q9P086 117 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 CFL2Q9Y281 166 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 MXRA5Q9NR99 2828 aa12.04□□□□□ -0.48
DDX41-210ENST00000509576 NUP214P35658 2090 aaPredicted RBP12.03□□□□□ -0.48
DDX41-210ENST00000509576 OR2M5A3KFT3 312 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 KLF4O43474 513 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 PSMG1O95456 288 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 IGKV1D-16P01601 117 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 RBP1P09455 135 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 NID1P14543 1247 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 EVI2BP34910 448 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 PCYT1AP49585 367 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 GAB1Q13480 694 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 BCL2A1Q16548 175 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 C6orf163Q5TEZ5 329 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 GGNQ86UU5 652 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 SLC44A2Q8IWA5 706 aaPredicted RBP12.03□□□□□ -0.48
DDX41-210ENST00000509576 C16orf78Q8WTQ4 265 aa12.03□□□□□ -0.48
DDX41-210ENST00000509576 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
DDX41-210ENST00000509576 TMEM237Q96Q45 408 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms