RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 UPK1AO00322 258 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 PDPK1O15530 556 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 SCO2O43819 266 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 NPHS1O60500 1241 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 NEFHP12036 1026 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 CYP4B1P13584 511 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 EFNA1P20827 205 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 PRPH2P23942 346 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 MSX1P28360 303 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 GPC1P35052 558 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 KRTAP10-9P60411 292 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 PSG6Q00889 435 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 TLE4Q04727 773 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 SNTB1Q13884 538 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 KRT71Q3SY84 523 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 ACSF3Q4G176 576 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 ZNF385BQ569K4 471 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 WDR93Q6P2C0 686 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 SEM1Q6ZVN7 128 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 NAXEQ8NCW5 288 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 TNIP2Q8NFZ5 429 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 ABTB1Q969K4 478 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 NTNG2Q96CW9 530 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 SLC35A4Q96G79 324 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 ROPN1BQ9BZX4 212 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 ROPN1Q9HAT0 212 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 FLRT3Q9NZU0 649 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 SH3BP4Q9P0V3 963 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 C19orf53Q9UNZ5 99 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 TRAF6Q9Y4K3 522 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 WIF1Q9Y5W5 379 aa13.49□□□□□ -0.25
UBE2D3-228ENST00000508974 A0A087WV62 115 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 LSM1O15116 133 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 HOXD4P09016 255 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 BMP5P22003 454 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 SSTR2P30874 369 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 ARRB2P32121 409 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PNLIPRP2P54317 469 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PRKAG1P54619 331 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 SRYQ05066 204 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 STX5Q13190 355 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 SNTA1Q13424 505 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 EFR3AQ14156 821 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 RIPPLY2Q5TAB7 128 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PLXDC2Q6UX71 529 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 GALNT10Q86SR1 603 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PLCZ1Q86YW0 608 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PM20D2Q8IYS1 436 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 OR2L13Q8N349 312 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 ELP4Q96EB1 424 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 WDYHV1Q96HA8 205 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PKNOX2Q96KN3 472 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 CCT7Q99832 543 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PARD6BQ9BYG5 372 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 PRDM14Q9GZV8 571 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 EML4Q9HC35 981 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 TAS2R7Q9NYW3 318 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 DKKL1Q9UK85 242 aa13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 RPH3AQ9Y2J0 694 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-228ENST00000508974 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 AHRRA9YTQ3 701 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 GMFGO60234 142 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 PEX11AO75192 247 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 CBR3O75828 277 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 GRK2P25098 689 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 GCKP35557 465 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 STARP49675 285 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 AGFG1P52594 562 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 MYBPHQ13203 477 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 GAB1Q13480 694 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 ZNHIT3Q15649 155 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 UGT3A2Q3SY77 523 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 IFNEQ86WN2 208 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 CLYBLQ8N0X4 340 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 PIK3R3Q92569 461 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 OTUB1Q96FW1 271 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 FCRL1Q96LA6 429 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 C1orf50Q9BV19 199 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 CENPHQ9H3R5 247 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 TAS2R10Q9NYW0 307 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 PPP4R1LQ9P1A2 415 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 CBLCQ9ULV8 474 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 WBP11Q9Y2W2 641 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 PCDHGB3Q9Y5G1 929 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 POLQO75417 2590 aa13.47□□□□□ -0.25
UBE2D3-228ENST00000508974 DOCK7Q96N67 2140 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 GXYLT2A0PJZ3 443 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 HSPB2A8KAH6 182 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 B4DXG7 233 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms