RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TOMM20Q15388 145 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 NHSL2Q5HYW2 709 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 RIPPLY2Q5TAB7 128 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 SLC30A6Q6NXT4 461 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 DMRTC2Q8IXT2 367 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 OR6Y1Q8NGX8 325 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 AGR3Q8TD06 166 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 C3orf30Q96M34 536 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 TSSK3Q96PN8 268 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 OR2B2Q9GZK3 357 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 KCNJ16Q9NPI9 418 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 MIEF1Q9NQG6 463 aa15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 C19orf53Q9UNZ5 99 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-215ENST00000506161 A0A087WV62 115 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 GXYLT2A0PJZ3 443 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 CCDC151A5D8V7 595 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 PLOD2O00469 737 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 PIP5K1BO14986 540 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 TYROBPO43914 113 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 EPPINO95925 133 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 SSTR2P30874 369 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 CEACAM8P31997 349 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 GSTM5P46439 218 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 AGFG1P52594 562 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 ZNF136P52737 540 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 GAB1Q13480 694 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 LARP4Q71RC2 724 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 OR2L13Q8N349 312 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 TWIST2Q8WVJ9 160 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 ERP27Q96DN0 273 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 C14orf79Q96F83 325 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 ZNF395Q9H8N7 513 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 RYDENQ9NUL5 291 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 GIMAP4Q9NUV9 329 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 C1orf109Q9NX04 203 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 WIF1Q9Y5W5 379 aa15.21■□□□□ 0.03
PDLIM7-215ENST00000506161 MPDZO75970 2070 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 SCO2O43819 266 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 ZIC3O60481 467 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 BCAS2O75934 225 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 HOXD4P09016 255 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 GABRA1P14867 456 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 MPIP34949 423 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 ETV4P43268 484 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 GFRA1P56159 465 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 B3GALT5-AS1P59052 145 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 NAA20P61599 178 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 HSPB3Q12988 150 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 PDE7AQ13946 482 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 WDR93Q6P2C0 686 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 RNF165Q6ZSG1 346 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 ZAR1Q86SH2 424 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 RIBC1Q8N443 379 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 C9orf106Q8NAJ2 232 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 NRGNQ92686 78 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 CAVIN3Q969G5 261 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 ABTB1Q969K4 478 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 GIMAP5Q96F15 307 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 KLHDC3Q9BQ90 382 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 ZDHHC2Q9UIJ5 367 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 PCDHGB3Q9Y5G1 929 aa15.2■□□□□ 0.02
PDLIM7-215ENST00000506161 H3BQF6 201 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 SLC28A1O00337 649 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 ITM2AO43736 263 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 FADS1O60427 444 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 NPHS1O60500 1241 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 LYPLA1O75608 230 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 FGF4P08620 206 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 CAPN3P20807 821 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 GRK2P25098 689 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 MAP3K8P41279 467 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 FRKP42685 505 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 PNLIPRP2P54317 469 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 RPP38P78345 283 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 FOXF2Q12947 444 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 SNTA1Q13424 505 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 APOOLQ6UXV4 268 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 CDH24Q86UP0 819 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 PLCZ1Q86YW0 608 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 TRIM42Q8IWZ5 723 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 SAMD14Q8IZD0 417 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 FBXO30Q8TB52 745 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 PIK3R3Q92569 461 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 OTUB1Q96FW1 271 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 TRIB1Q96RU8 372 aa15.19■□□□□ 0.02
PDLIM7-215ENST00000506161 CCT7Q99832 543 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms