RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 OR9Q2Q8NGE9 314 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 OR56A1Q8NGH5 318 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 RASSF5Q8WWW0 418 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 MUL1Q969V5 352 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 ZNF681Q96N22 645 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 GSDMCQ9BYG8 508 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 CCDC90BQ9GZT6 254 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 SCN3BQ9NY72 215 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 TMEM9Q9P0T7 183 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 CPNE7Q9UBL6 633 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 PCDHGA6Q9Y5G7 932 aa10.87□□□□□ -0.67
USP46-204ENST00000503060 GPC6Q9Y625 555 aaPredicted RBP10.87□□□□□ -0.67
USP46-204ENST00000503060 A0A0J9YVX5 310 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SNPHO15079 494 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 P2RX6O15547 441 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 NDUFS2O75306 463 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SERPINB7O75635 380 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 FHP07954 510 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SMIM10L1P0DMW3 83 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 NR2F6P10588 404 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ITIH1P19827 911 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PCMT1P22061 227 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PPP2R1BP30154 601 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 GGT2P36268 569 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SNRPNP63162 240 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 RPP30P78346 268 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 SLC35A2P78381 396 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 LASP1Q14847 261 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 ZNF542PQ5EBM4 170 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 FDX2Q6P4F2 183 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 OGFOD3Q6PK18 319 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 TMEM107Q6UX40 140 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 Q6ZPB1 254 aaPredicted RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 FRMD1Q8N878 549 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PHF10Q8WUB8 498 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SMIM10Q96HG1 83 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ZNF354BQ96LW1 612 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ROGDIQ9GZN7 287 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 POT1Q9NUX5 634 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 ANKMY1Q9P2S6 941 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ERVK-18Q9QC07 812 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 RHCGQ9UBD6 479 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SEC14L3Q9UDX4 400 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 UNC80Q8N2C7 3258 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ARRDC5A6NEK1 342 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 FFAR1O14842 300 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 EMC8O43402 210 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PCDHGA12O60330 932 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 WBP4O75554 376 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 ATE1O95260 518 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 HMGN2P05204 90 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 CBLP22681 906 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 MPIP34949 423 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SF3B4Q15427 424 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP46-204ENST00000503060 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 PROX2Q3B8N5 592 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ENTHD1Q8IYW4 607 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 TAGAPQ8N103 731 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 BBS10Q8TAM1 723 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ZCCHC10Q8TBK6 192 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 APH1BQ8WW43 257 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 OTUB1Q96FW1 271 aaPredicted RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 GPR174Q9BXC1 333 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PINK1Q9BXM7 581 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ZNF556Q9HAH1 456 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SLC2A4RGQ9NR83 387 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 WSB2Q9NYS7 404 aaPredicted RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 PILRAQ9UKJ1 303 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 RNF6Q9Y252 685 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 PCDHGB1Q9Y5G3 927 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 ZNF780BQ9Y6R6 833 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
USP46-204ENST00000503060 GOLGA4Q13439 2230 aaKnown RBP10.86□□□□□ -0.67
USP46-204ENST00000503060 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 SPTY2D1-AS1A0A0U1RR47 76 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 NOL3O60936 208 aaKnown RBP10.85□□□□□ -0.67
USP46-204ENST00000503060 FAM20BO75063 409 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 CHRNB1P11230 501 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 SRFP11831 508 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 CRISP3P54108 245 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 TMBIM6P55061 237 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 PRR5P85299 388 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 TNFRSF17Q02223 184 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 FUT5Q11128 374 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 FZD2Q14332 565 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 NPTX1Q15818 432 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 COLEC12Q5KU26 742 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 TCTN3Q6NUS6 607 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 OLIG3Q7RTU3 272 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 SFTPA2Q8IWL1 248 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 OR4D11Q8NGI4 311 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 OR9A2Q8NGT5 310 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 TEX47Q8TBZ9 253 aa10.85□□□□□ -0.67
USP46-204ENST00000503060 SLC37A2Q8TED4 501 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms