RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 EEF1E1-BLOC1S5C9J1V9 151 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 EEF1E1O43324 174 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 CTAG2O75638 210 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 IL18BPO95998 194 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 TMIGD3P0DMS9 266 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 DDCP20711 480 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 NTSP30990 170 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 SRD5A2P31213 254 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 DNAJA1P31689 397 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 CLK3P49761 638 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 ZNF136P52737 540 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 PNLIPRP2P54317 469 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 SRYQ05066 204 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 TESK1Q15569 626 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 ZNHIT3Q15649 155 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 SLC44A2Q8IWA5 706 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 HOMEZQ8IX15 550 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 CHDHQ8NE62 594 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 ZFP3Q96NJ6 502 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 GPATCH1Q9BRR8 931 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 OR2B2Q9GZK3 357 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 IQCGQ9H095 443 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 PPCSQ9HAB8 311 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 FOLH1BQ9HBA9 442 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 SIRT5Q9NXA8 310 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 WIF1Q9Y5W5 379 aa12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 PLOD3O60568 738 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 TSPAN2O60636 221 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 CHMP24386 653 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 TACR1P25103 407 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 CPA2P48052 419 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 NCBP2P52298 156 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■□□□ 12
CTDSP1-212ENST00000494067 GAS1P54826 345 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 PSMD4P55036 377 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 ZNF155Q12901 538 aaPredicted RBP12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 GAB1Q13480 694 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 CLEC6AQ6EIG7 209 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 FAM71E1Q6IPT2 247 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 OR4K17Q8NGC6 315 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 FAM76AQ8TAV0 307 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 UBLCP1Q8WVY7 318 aaPredicted RBP12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 G6PC3Q9BUM1 346 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 ANKZF1Q9H8Y5 726 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 Q9N2J8 555 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 RASSF1Q9NS23 344 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 PPP4R1LQ9P1A2 415 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 FBXL2Q9UKC9 423 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 DOCK7Q96N67 2140 aa12.17□□□□□ -0.46
CTDSP1-212ENST00000494067 PCNX3Q9H6A9 2034 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 A0A087WV62 115 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 A6NNC1 897 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 MYO1GB0I1T2 1018 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 RSL1D1O76021 490 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 JUNP05412 331 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 DNASE1P24855 282 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 GRK2P25098 689 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 CRHR1P34998 444 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 AGFG1P52594 562 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 IST1P53990 364 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 DIO3P55073 304 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 SORDQ00796 357 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 PSG6Q00889 435 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 PCLAFQ15004 111 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 DECR1Q16698 335 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 CYP27C1Q4G0S4 372 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 TRIM46Q7Z4K8 759 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 P4HA3Q7Z4N8 544 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 TDRPQ86YL5 185 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 GRAMD2AQ8IUY3 354 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 WNT2BQ93097 391 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 PIGMQ9H3S5 423 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 TUBB1Q9H4B7 451 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 L2HGDHQ9H9P8 463 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 C3orf14Q9HBI5 128 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 OXSMQ9NWU1 459 aa12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-212ENST00000494067 TTC36A6NLP5 189 aa12.15□□□□□ -0.46
CTDSP1-212ENST00000494067 SLC28A1O00337 649 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms