RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 MIPOL1Q8TD10 442 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 PTPMT1Q8WUK0 201 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 GEMIN6Q8WXD5 167 aaKnown RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 LRTOMTQ8WZ04 291 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 KIAA1143Q96AT1 154 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 TAMM41Q96BW9 452 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 CTHRC1Q96CG8 243 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 VMP1Q96GC9 406 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 SENP5Q96HI0 755 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 SLC46A1Q96NT5 459 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 PKP2Q99959 881 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 LMF2Q9BU23 707 aaKnown RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 DOHHQ9BU89 302 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 NUDT9Q9BW91 350 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 BTBD2Q9BX70 525 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 VCXQ9H320 206 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 MAGIXQ9H6Y5 334 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 WDR54Q9H977 334 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 AKIRIN1Q9H9L7 192 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 POLR1BQ9H9Y6 1135 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 DUSP22Q9NRW4 184 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 CCM2LQ9NUG4 571 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 OLAHQ9NV23 265 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 KLHL28Q9NXS3 571 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 C6orf203Q9P0P8 240 aaPredicted RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 MRTO4Q9UKD2 239 aaKnown RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 MKLN1Q9UL63 735 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 CBLCQ9ULV8 474 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 FAM32AQ9Y421 112 aaKnown RBP7.47□□□□□ -1.21
FDPS-218ENST00000492887 KCNE3Q9Y6H6 103 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
FDPS-218ENST00000492887 FAM186AA6NE01 2351 aa7.46□□□□□ -1.21
FDPS-218ENST00000492887 SAC3D1A6NKF1 404 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 VSTM2BA6NLU5 285 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 OR6C76A6NM76 312 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CNOT3O75175 753 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 SOX30O94993 753 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 NKX2-2O95096 273 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 DLGAP3O95886 979 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CYC1P08574 325 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 HPGDP15428 266 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 IL7RP16871 459 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ZNF23P17027 643 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 TNFRSF1BP20333 461 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 VHLP40337 213 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 EMDP50402 254 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 RNF144AP50876 292 aaPredicted RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 NR0B1P51843 470 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 EFNA3P52797 238 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 PSMD4P55036 377 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 NRG3P56975 720 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SLC37A1P57057 533 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SELENOWP63302 87 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SPIBQ01892 262 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 PLCXD2Q0VAA5 305 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FUT5Q11128 374 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 DUSP8Q13202 625 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FXNQ16595 210 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 DECR1Q16698 335 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 RSPO4Q2I0M5 234 aaPredicted RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 BTBD16Q32M84 506 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FLYWCH1Q4VC44 716 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 LIN52Q52LA3 116 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 EIPR1Q53HC9 387 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FAM69BQ5VUD6 431 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 PRAMEF8Q5VWM4 474 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 PRAMEF7Q5VXH5 474 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 LPCAT4Q643R3 524 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 HSDL2Q6YN16 418 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 DEF8Q6ZN54 512 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CCDC80Q76M96 950 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ERMP1Q7Z2K6 904 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CYP4Z1Q86W10 505 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 VRK2Q86Y07 508 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FAM86B1Q8N7N1 296 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CATSPER1Q8NEC5 780 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 B3GNT7Q8NFL0 401 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 OR52E4Q8NGH9 312 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 OR2Y1Q8NGV0 311 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 OR52P1PQ8NH57 321 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ZNF721Q8TF20 911 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 THAP3Q8WTV1 239 aaPredicted RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 EME1Q96AY2 570 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SLCO4A1Q96BD0 722 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 LCORQ96JN0 433 aaPredicted RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 TRNT1Q96Q11 434 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 TREX2Q9BQ50 279 aaPredicted RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 G6PC3Q9BUM1 346 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 BDH2Q9BUT1 245 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 CHID1Q9BWS9 393 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 QRSL1Q9H0R6 528 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 SLC26A1Q9H2B4 701 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ARMC1Q9NVT9 282 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 NTMQ9P121 344 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ZNF639Q9UID6 485 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 FARSAQ9Y285 508 aaKnown RBP7.46□□□□□ -1.22
FDPS-218ENST00000492887 DTX4Q9Y2E6 619 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SLC9A8Q9Y2E8 581 aa7.46□□□□□ -1.22
FDPS-218ENST00000492887 SH3GLB1Q9Y371 365 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms