RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 HCRTR2O43614 444 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 FADS1O60427 444 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 PLIN3O60664 434 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 NME6O75414 186 aaPredicted RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ERN1O75460 977 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 REM1O75628 298 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 RSL1D1O76021 490 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ZWINTO95229 277 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ANXA4P09525 319 aaPredicted RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 EPXP11678 715 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 HMOX2P30519 316 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 CRHR1P34998 444 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ALDH9A1P49189 494 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 EEF1A1P68104 462 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 OCRLQ01968 901 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF763Q0D2J5 394 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 EFR3AQ14156 821 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 TEX35Q5T0J7 233 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 EEF1A1P5Q5VTE0 462 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 IKBIPQ70UQ0 350 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 KIF18BQ86Y91 864 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ZZZ3Q8IYH5 903 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 FAM9CQ8IZT9 166 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 RDH11Q8TC12 318 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 NRGNQ92686 78 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 KAT2AQ92830 837 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 EXOSC8Q96B26 276 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 FCRL1Q96LA6 429 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 KCNA7Q96RP8 456 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ADOQ96SZ5 270 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 TM9SF2Q99805 663 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 TUBA1CQ9BQE3 449 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 LMF2Q9BU23 707 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 POLDIP3Q9BY77 421 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 PPCSQ9HAB8 311 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 MID1IP1Q9NPA3 183 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 OXSMQ9NWU1 459 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 TAS2R9Q9NYW1 312 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 NTMQ9P121 344 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 FBXL2Q9UKC9 423 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 CBLCQ9ULV8 474 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 CAMK2AQ9UQM7 478 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ARID1AO14497 2285 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 ROS1P08922 2347 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 IGLV3-32A0A0A0MS00 114 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 GNG14A0A1W2PPG7 69 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TTC36A6NLP5 189 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 A8MXE2 369 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 UPK1AO00322 258 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TBX19O60806 448 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 GLRA3O75311 464 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TNFSF13O75888 250 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CRHP06850 196 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CYP4B1P13584 511 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 GRK2P25098 689 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 UQCRC1P31930 480 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 FRKP42685 505 aaPredicted RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ART1P52961 327 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CLDN15P56746 228 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 MRPS22P82650 360 aaKnown RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 SLC18A2Q05940 514 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 FOXF2Q12947 444 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 SNTB1Q13884 538 aaKnown RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 RCAN2Q14206 197 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ERCC6LQ2NKX8 1250 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TMEM44Q2T9K0 475 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CCDC153Q494R4 210 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 GLYR1Q49A26 553 aaPredicted RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 EXOSC6Q5RKV6 272 aaKnown RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 NOXRED1Q6NXP6 359 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ENPP6Q6UWR7 440 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 LARP4Q71RC2 724 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TMEM200AQ86VY9 491 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CDC20BQ86Y33 519 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 OR4N2Q8NGD1 307 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ELP4Q96EB1 424 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 LRRC46Q96FV0 321 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 AMDHD1Q96NU7 426 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TRIB1Q96RU8 372 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 GPATCH1Q9BRR8 931 aaKnown RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 SFXN3Q9BWM7 321 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 RTN4RQ9BZR6 473 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 CLEC4MQ9H2X3 399 aaPredicted RBP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 LIME1Q9H400 295 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 PLEKHF2Q9H8W4 249 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 TAS2R10Q9NYW0 307 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 KLRF1Q9NZS2 232 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ST6GALNAC2Q9UJ37 374 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ABCG2Q9UNQ0 655 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 MAPRE3Q9UPY8 281 aa7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 NIPBLQ6KC79 2804 aaeCLIP7.59□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 TUBAL3A6NHL2 446 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 CLCA1A8K7I4 914 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 LINC01387J3KSC0 135 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 COQ9O75208 318 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms