RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LRRC2Q9BYS8 371 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC26A1Q9H2B4 701 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 PNNQ9H307 717 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RAVER2Q9HCJ3 691 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 SMOXQ9NWM0 555 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM120CQ9NX05 1096 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 GCNT4Q9P109 453 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 KCNG2Q9UJ96 466 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ANGPTL2Q9UKU9 493 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TBC1D24Q9ULP9 559 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 C15orf41Q9Y2V0 281 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 OR10H1Q9Y4A9 318 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 NME7Q9Y5B8 376 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 RNF123Q5XPI4 1314 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TNS1Q9HBL0 1735 aaKnown RBP2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TOGARAM1Q9Y4F4 1720 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 TNS2Q63HR2 1409 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 ATP10DQ9P241 1426 aa2.83□□□□□ -1.96
DEPDC1-204ENST00000489862 A0A087WUV0 522 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 IGHV4-28A0A0C4DH34 117 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 LOC100506127A0A0U1RQW1 187 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ESYT2A0FGR8 921 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 HEATR9A2RTY3 570 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ARPC2O15144 300 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 LINC01565O15544 149 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SCO2O43819 266 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CST1P01037 141 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KRT14P02533 472 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 VTNP04004 478 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SFTPBP07988 381 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RHOXF2BP0C7M4 288 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KRT3P12035 628 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 GPX3P22352 226 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NF2P35240 595 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MAGEA8P43361 318 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TUBA1BP68363 451 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BNIP1Q12981 228 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 HEPACAMQ14CZ8 416 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SYCP1Q15431 976 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MRPL23Q16540 153 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CTF1Q16619 201 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MAPK6Q16659 721 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 EXOC3L2Q2M3D2 409 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 Q3ZCU0 254 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NKAIN1Q4KMZ8 207 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ARMCX4Q5H9R4 360 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BSPRYQ5W0U4 402 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 FUT10Q6P4F1 479 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KCNIP4Q6PIL6 250 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 HSDL2Q6YN16 418 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CDHR3Q6ZTQ4 885 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 G2E3Q7L622 706 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TRPM8Q7Z2W7 1104 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KCNMB4Q86W47 210 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PTOV1Q86YD1 416 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 EFCAB13Q8IY85 973 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CLEC4FQ8N1N0 589 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TCAIMQ8N3R3 496 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 GTPBP8Q8N3Z3 284 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ARFGAP2Q8N6H7 521 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ALLCQ8N6M5 410 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 POC1AQ8NBT0 407 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NFAM1Q8NET5 270 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BBS1Q8NFJ9 593 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 OR4K14Q8NGD5 310 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SPATA22Q8NHS9 363 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KCNG3Q8TAE7 436 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TRMT10AQ8TBZ6 339 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM163Q8TC26 289 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM3CQ92520 227 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TSACCQ96A04 125 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BPIFA2Q96DR5 249 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PELI1Q96FA3 418 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM19Q96HH6 336 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 C10orf90Q96M02 699 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TUBA1CQ9BQE3 449 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RHOXF2Q9BQY4 288 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC25A33Q9BSK2 321 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TRAF4Q9BUZ4 470 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RBM24Q9BX46 236 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PKIBQ9C010 78 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 GANQ9H2C0 597 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM185BQ9H7F4 350 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KAT8Q9H7Z6 458 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SPACA1Q9HBV2 294 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SGK2Q9HBY8 427 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF639Q9UID6 485 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CDH9Q9ULB4 789 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RNF24Q9Y225 148 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 YIPF1Q9Y548 306 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLCO1B1Q9Y6L6 691 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PKD1L3Q7Z443 1732 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 hDV102S1A0JD36 115 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 OR5K3A6NET4 321 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SNTNA6NMZ2 147 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 GOLGA8TH3BQL2 631 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 DLGAP1O14490 977 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SRPX2O60687 465 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms