RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ICAM1P05362 532 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 THP07101 528 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 GP1BAP07359 652 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SAGP10523 405 aaPredicted RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 TFPIP10646 304 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CPN1P15169 458 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MUC1P15941 1255 aaPredicted RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 PAX6P26367 422 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MST1P26927 711 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 RBMS1P29558 406 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 HMGA2P52926 109 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CTSCP53634 463 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CAV3P56539 151 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ERVPABLB-1P60509 514 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 RPS25P62851 125 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 E2F1Q01094 437 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC3A1Q07837 685 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SCAPQ12770 1279 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SREBF2Q12772 1141 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 PDZK1IP1Q13113 114 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 DYRK1AQ13627 763 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 HTR4Q13639 388 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MBTPS1Q14703 1052 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SEC23BQ15437 767 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZSWIM7Q19AV6 140 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ATP13A5Q4VNC0 1218 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SGO1Q5FBB7 561 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC25A30Q5SVS4 291 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 LIN54Q6MZP7 749 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 RPL13AP3Q6NVV1 102 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 LYPD4Q6UWN0 246 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MPZL3Q6UWV2 235 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ANGPTL8Q6UXH0 198 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 LRRN1Q6UXK5 716 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ABHD15Q6UXT9 468 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MSANTD1Q6ZTZ1 278 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MISPQ8IVT2 679 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 LAS2Q8IYD9 372 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 LGI4Q8N135 537 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NAGSQ8N159 534 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 TOMM5Q8N4H5 51 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF561Q8N587 486 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF527Q8NB42 609 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 BEST4Q8NFU0 473 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR150Q8NGU9 434 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 OR10K1Q8NGX5 313 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 AKR7LQ8NHP1 331 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 GOT1L1Q8NHS2 421 aaPredicted RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CLEC4CQ8WTT0 213 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 PIH1D2Q8WWB5 315 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 HSD17B8Q92506 261 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 FATE1Q969F0 183 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NTAN1Q96AB6 310 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 KLHDC7BQ96G42 594 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 TPD52L3Q96J77 140 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 TAAR1Q96RJ0 339 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NPY6RQ99463 290 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SSX3Q99909 188 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NIPSNAP1Q9BPW8 284 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 DOHHQ9BU89 302 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 EDEM2Q9BV94 578 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 IFT27Q9BW83 186 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ZDHHC5Q9C0B5 715 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 EGLN1Q9GZT9 426 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 ARL6Q9H0F7 186 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC38A1Q9H2H9 487 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 MTG2Q9H4K7 406 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 EXOSC3Q9NQT5 275 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NANSQ9NR45 359 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 RLIMQ9NVW2 624 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 FTSJ1Q9UET6 329 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 NDOR1Q9UHB4 597 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 FBXL3Q9UKT7 428 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CBLCQ9ULV8 474 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 PLEKHA6Q9Y2H5 1048 aa4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 CARHSP1Q9Y2V2 147 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 BRCA1P38398 1863 aaKnown RBP4.49□□□□□ -1.69
SNRNP40-206ENST00000489853 A0A1B0GUH1 482 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM129A0AVI4 362 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 IRGMA1A4Y4 181 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ARRDC5A6NEK1 342 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 POM121BA6NF01 834 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DDTLA6NHG4 134 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 YDJCA8MPS7 323 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GABRR3A8MPY1 467 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 WASH3PC4AMC7 463 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM72CH0Y354 149 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 M0R129 80 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TLR4O00206 839 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR31O00270 319 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DLL1O00548 723 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 IMPA2O14732 288 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TGM5O43548 720 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SEMA7AO75326 666 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RECQL4O94761 1208 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms