RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PRAMEF25A6NGN4 478 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 GOLGA8NF8WBI6 632 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 RNASET2O00584 256 aaKnown RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 ANKRD28O15084 1053 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 CFLARO15519 480 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 SUSD5O60279 629 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 HCN1O60741 890 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 SOX30O94993 753 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 KCNH1O95259 989 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 C6orf47O95873 294 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 LDLRP01130 860 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 RFPL3SP0C7P2 107 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 ELAVL4P26378 380 aaKnown RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 MAP3K8P41279 467 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 KIR3DL1P43629 444 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 CCT3P49368 545 aaKnown RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 PRIM2P49643 509 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 C3AR1Q16581 482 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 DPY19L1Q2PZI1 675 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 ANXA8L1Q5VT79 327 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 TIGD3Q6B0B8 471 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 NXNQ6DKJ4 435 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 DESI1Q6ICB0 168 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 MTFR2Q6P444 385 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 TRILQ7L0X0 811 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 FGD2Q7Z6J4 655 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 FJX1Q86VR8 437 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 GPR151Q8TDV0 419 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 ACTRT2Q8TDY3 377 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 MOAP1Q96BY2 351 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 FAM120BQ96EK7 910 aaKnown RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 GIMAP5Q96F15 307 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 OSBPL11Q9BXB4 747 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 LDAHQ9H6V9 325 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 ZNF703Q9H7S9 590 aaPredicted RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 ZCCHC3Q9NUD5 404 aaKnown RBP15.88■□□□□ 0.13
MDC1-206ENST00000489540 AIG1Q9NVV5 245 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 KLRF1Q9NZS2 232 aa15.88■□□□□ 0.13
MDC1-206ENST00000489540 OR14I1A6ND48 311 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 CCL21O00585 134 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 NKX2-2O95096 273 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 TGDSO95455 350 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 SPDYE7PQ495Y7 208 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 MFSD12Q6NUT3 480 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 BHLHB9Q6PI77 547 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 WDR53Q7Z5U6 358 aaPredicted RBP15.87■□□□□ 0.13
MDC1-206ENST00000489540 EID3Q8N140 333 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 OR56A1Q8NGH5 318 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 OR1J4Q8NGS1 313 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 FAM57AQ8TBR7 257 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 SLC9A6Q92581 669 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 EFHD2Q96C19 240 aaPredicted RBP15.87■□□□□ 0.13
MDC1-206ENST00000489540 PSMG3-AS1Q96PY0 264 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 SUCOQ9UBS9 1254 aaKnown RBP15.87■□□□□ 0.13
MDC1-206ENST00000489540 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 USH1CQ9Y6N9 552 aa15.87■□□□□ 0.13
MDC1-206ENST00000489540 TRGV5A0A0B4J1U4 118 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 PRSS51A0A1B0GVH4 220 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 ZNF195O14628 629 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 SNPHO15079 494 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 IL33O95760 270 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 ALOX5P09917 674 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 ALDOCP09972 364 aaKnown RBP15.86■□□□□ 0.13
MDC1-206ENST00000489540 ESRRAP11474 423 aaPredicted RBP15.86■□□□□ 0.13
MDC1-206ENST00000489540 IDO1P14902 403 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 PTGDSP41222 190 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 MAN2A2P49641 1150 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 SLC9B1Q4ZJI4 515 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 FNDC7Q5VTL7 733 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 OR4F3Q6IEY1 312 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 DOLPP1Q86YN1 238 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 SFXN5Q8TD22 340 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 CKAP2Q8WWK9 683 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 GNRHR2Q96P88 292 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 EXO5Q9H790 373 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 CXorf36Q9H7Y0 433 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 SLCO1B3Q9NPD5 702 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 GIN1Q9NXP7 522 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 SH3BGRL2Q9UJC5 107 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 TINAGQ9UJW2 476 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 C15orf41Q9Y2V0 281 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 GPR45Q9Y5Y3 372 aa15.86■□□□□ 0.13
MDC1-206ENST00000489540 E9PBE3 544 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 AQP7O14520 342 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 BCKDKO14874 412 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 CBR3O75828 277 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 HMGN2P05204 90 aaKnown RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 TPOP07202 933 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 KRT16P08779 473 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 CELA3AP09093 270 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 CYP4B1P13584 511 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 GDF1P27539 372 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 S100A3P33764 101 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 CLK3P49761 638 aaKnown RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 WNT3P56703 355 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 HBA1P69905 142 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 GSTA3Q16772 222 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 EPGNQ6UW88 154 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ANGPTL8Q6UXH0 198 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 MAVSQ7Z434 540 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms