RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 MYH11P35749 1972 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 MYH3P11055 1940 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 GJB3O75712 270 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 SDC1P18827 310 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 CTXN1P60606 82 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 KEAP1Q14145 624 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 KRBOX4Q5JUW0 171 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 MFSD6LQ8IWD5 586 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 RBM12BQ8IXT5 1001 aaKnown RBP16.69■□□□□ 0.26
NPHP4-209ENST00000489180 PIANPQ8IYJ0 282 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 MS4A15Q8N5U1 240 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 SMIM14Q96QK8 99 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 KCMF1Q9P0J7 381 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 TRAPPC13A5PLN9 417 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 TVP23AA6NH52 213 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 GPR39O43194 453 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 SLC2A5P22732 501 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 GSTM4Q03013 218 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 RNASE10Q5GAN6 216 aaKnown RBP16.69■□□□□ 0.26
NPHP4-209ENST00000489180 FAM69BQ5VUD6 431 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 SLC35F2Q8IXU6 374 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 GDPD1Q8N9F7 314 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 MACROD1Q9BQ69 325 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 HIF3AQ9Y2N7 669 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF623O75123 536 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 EDN1P05305 212 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 PTPN6P29350 595 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 PCGF3Q3KNV8 242 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 C6orf132Q5T0Z8 1188 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 FAM205BPQ63HN1 556 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 GSG1LQ6UXU4 331 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 ZSCAN1Q8NBB4 408 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 OR5W2Q8NH69 310 aa16.69■□□□□ 0.26
NPHP4-209ENST00000489180 SNIP1Q8TAD8 396 aaKnown RBP16.69■□□□□ 0.26
NPHP4-209ENST00000489180 MTHFD2LQ9H903 347 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-209ENST00000489180 NPIPA5A0A0B4J1W7 369 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 A6NIN4 97 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 NPIPA7E9PJI5 369 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 NPIPA8P0DM63 369 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 PBX2P40425 430 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 PITPNBP48739 271 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 PLP2Q04941 152 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 FGL1Q08830 312 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 RAET1LQ5VY80 246 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 AWAT2Q6E213 333 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 FAM198BQ6UWH4 519 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 NLGN4XQ8N0W4 816 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 DEFB126Q9BYW3 111 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 CPNE5Q9HCH3 593 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 UBFD1O14562 309 aaKnown RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 SPDEFO95238 335 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 CSF2RAP15509 400 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 MC3RP41968 323 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 HOXC5Q00444 222 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 RELAQ04206 551 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 MAMDC4Q6UXC1 1216 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 COMTD1Q86VU5 262 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 OR7G3Q8NG95 312 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 OR2T35Q8NGX2 323 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 SPRYD4Q8WW59 207 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 THSD1Q9NS62 852 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 PCDHGA8Q9Y5G5 932 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ATE1O95260 518 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 IFNA5P01569 189 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 MFSD13AQ14CX5 517 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 LARP4Q71RC2 724 aaKnown RBP eCLIP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF486Q96H40 463 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF597Q96LX8 424 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF442Q9H7R0 627 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 GPN2Q9H9Y4 310 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 REV1Q9UBZ9 1251 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 HEMK1Q9Y5R4 338 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ARPC5O15511 151 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ARSAP15289 507 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 GM2AP17900 193 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 IL4RP24394 825 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 AQP2P41181 271 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 USP53Q70EK8 1073 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 RNF175Q8N4F7 328 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 RIMS3Q9UJD0 308 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 MEIS3P1A6NDR6 274 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 TP53I11O14683 189 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 CNOT4O95628 575 aaKnown RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 JUNDP17535 347 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 AADACL4Q5VUY2 407 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 SLC18B1Q6NT16 456 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 FIGLAQ6QHK4 219 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 OR5T1Q8NG75 326 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 ACPTQ9BZG2 426 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 WDR6Q9NNW5 1121 aaKnown RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 TEX10Q9NXF1 929 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-209ENST00000489180 PRSS21Q9Y6M0 314 aa16.68■□□□□ 0.26
NPHP4-209ENST00000489180 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 SYNGR4O95473 234 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 RPS17P08708 135 aaKnown RBP16.67■□□□□ 0.26
NPHP4-209ENST00000489180 PER3P56645 1201 aa16.67■□□□□ 0.26
NPHP4-209ENST00000489180 AAK1Q2M2I8 961 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms