RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ERCC6LQ2NKX8 1250 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 LUZP2Q86TE4 346 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 LCA5Q86VQ0 697 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 IFNEQ86WN2 208 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 SLC22A9Q8IVM8 553 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 SLC44A2Q8IWA5 706 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 SAMD14Q8IZD0 417 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 EFHD2Q96C19 240 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 RBM24Q9BX46 236 aaKnown RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 GSTO2Q9H4Y5 243 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 PLEKHF2Q9H8W4 249 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 GIMAP4Q9NUV9 329 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 SIRT5Q9NXA8 310 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 CLCF1Q9UBD9 225 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 EDARQ9UNE0 448 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 RPH3AQ9Y2J0 694 aaPredicted RBP11.06□□□□□ -0.64
VPS16-208ENST00000487461 WIF1Q9Y5W5 379 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 NF1P21359 2839 aa11.06□□□□□ -0.64
VPS16-208ENST00000487461 MYO1GB0I1T2 1018 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 PLOD2O00469 737 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 ATE1O95260 518 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 TGM6O95932 706 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 ENO1P06733 434 aaKnown RBP11.05□□□□□ -0.64
VPS16-208ENST00000487461 FAM153BP0C7A2 387 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 ZNF708P17019 499 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 DDCP20711 480 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 TCEA1P23193 301 aaKnown RBP11.05□□□□□ -0.64
VPS16-208ENST00000487461 CHMP24386 653 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 DPP4P27487 766 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 IL12BP29460 328 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 KRT20P35900 424 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 PSG6Q00889 435 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 FOXD4Q12950 439 aaPredicted RBP11.05□□□□□ -0.64
VPS16-208ENST00000487461 FAM153CQ494X1 144 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 SPDYAQ5MJ70 313 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 FBXW10Q5XX13 1052 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 AAGABQ6PD74 315 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 PAMR1Q6UXH9 720 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 FAM9CQ8IZT9 166 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 GCNT2Q8N0V5 402 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 MZB1Q8WU39 189 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 SFXN2Q96NB2 322 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 BBS4Q96RK4 519 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 DSN1Q9H410 356 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 MID1IP1Q9NPA3 183 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 TAS2R9Q9NYW1 312 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 EMCNQ9ULC0 261 aa11.05□□□□□ -0.64
VPS16-208ENST00000487461 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
VPS16-208ENST00000487461 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 CCDC151A5D8V7 595 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 A8MXE2 369 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 G3V2L1 256 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 FADS1O60427 444 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 TNFSF13O75888 250 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 RAF1P04049 648 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 HRGP04196 525 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 JUNP05412 331 aaKnown RBP11.04□□□□□ -0.64
VPS16-208ENST00000487461 NCBP2P52298 156 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS16-208ENST00000487461 CLDN15P56746 228 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 PPP2R2AP63151 447 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 ADAM8P78325 824 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 PSPHP78330 225 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 GAB1Q13480 694 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 SLC29A2Q14542 456 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 BCL2A1Q16548 175 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 FAM71E1Q6IPT2 247 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 FADS6Q8N9I5 356 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS16-208ENST00000487461 ACMSDQ8TDX5 336 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 POM121Q96HA1 1249 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 DACH2Q96NX9 599 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 ALPK1Q96QP1 1244 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 YIPF4Q9BSR8 244 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 TXLNGYQ9BZA5 131 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 RTN4RQ9BZR6 473 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 STMN4Q9H169 189 aaPredicted RBP11.04□□□□□ -0.64
VPS16-208ENST00000487461 PIGMQ9H3S5 423 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
VPS16-208ENST00000487461 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 FLRT3Q9NZU0 649 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 DCDC2Q9UHG0 476 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 DKKL1Q9UK85 242 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 STK38LQ9Y2H1 464 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 OR10H1Q9Y4A9 318 aa11.04□□□□□ -0.64
VPS16-208ENST00000487461 MED12LQ86YW9 2145 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 A0A087WV62 115 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 A0A1W2PPR1 153 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 UPK1AO00322 258 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 HCRTR2O43614 444 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 SCO2O43819 266 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 GSTA1P08263 222 aa11.03□□□□□ -0.64
VPS16-208ENST00000487461 EVI2BP34910 448 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms