RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 SERGEFQ9UGK8 458 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 ACSL5Q9ULC5 683 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 RFXAPO00287 272 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 ACADMP11310 421 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 NAGAP17050 411 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 RPS25P62851 125 aaKnown RBP16.46■□□□□ 0.23
TNXB-205ENST00000486148 CD83Q01151 205 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SDE2Q6IQ49 451 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 KIAA1211LQ6NV74 962 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 TMEM64Q6YI46 380 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SHFQ7M4L6 423 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 PRICKLE2Q7Z3G6 844 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 LSRQ86X29 649 aaPredicted RBP16.46■□□□□ 0.23
TNXB-205ENST00000486148 LINC00471Q8N535 108 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 ACOT4Q8N9L9 421 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SETD6Q8TBK2 473 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 GATAD2BQ8WXI9 593 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SLC9A6Q92581 669 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 RNFT2Q96EX2 444 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 ASB16Q96NS5 453 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SAP130Q9H0E3 1048 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 WDR26Q9H7D7 661 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 PLEKHB1Q9UF11 243 aaPredicted RBP16.46■□□□□ 0.23
TNXB-205ENST00000486148 CHD9Q3L8U1 2897 aa16.46■□□□□ 0.23
TNXB-205ENST00000486148 SNRNP200O75643 2136 aaKnown RBP16.46■□□□□ 0.22
TNXB-205ENST00000486148 OR52A4PA6NMU1 304 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 SCO1O75880 301 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 AIFM1O95831 613 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 HIST1H1TP22492 207 aaPredicted RBP16.45■□□□□ 0.22
TNXB-205ENST00000486148 WNT4P56705 351 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 BNC1Q01954 994 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 MLLT1Q03111 559 aaPredicted RBP16.45■□□□□ 0.22
TNXB-205ENST00000486148 EFR3AQ14156 821 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 IRF4Q15306 451 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 TAB1Q15750 504 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 TMEM35AQ53FP2 167 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 C3orf38Q5JPI3 329 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 ARMC4Q5T2S8 1044 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 ABHD17CQ6PCB6 329 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 RAB42Q8N4Z0 105 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 SYT14Q8NB59 555 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 TMEM163Q8TC26 289 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 EQTNQ9NQ60 294 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 CNIH4Q9P003 139 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 PCDHGB2Q9Y5G2 931 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 A0A0G2JPF8 293 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 A0A1W2PQ09 198 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 HNRNPCL2B2RXH8 293 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 HNRNPCL3B7ZW38 293 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 PAK4O96013 591 aaPredicted RBP16.45■□□□□ 0.22
TNXB-205ENST00000486148 TRAPPC2P0DI81 140 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 TRAPPC2BP0DI82 140 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 HNRNPCL4P0DMR1 293 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 MYL12AP19105 171 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 CERS1P27544 350 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 UQCRC1P31930 480 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 CD79BP40259 229 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 FGL2Q14314 439 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 PXDC1Q5TGL8 231 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 VRK2Q86Y07 508 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 FBXL6Q8N531 539 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 OMA1Q96E52 524 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 PINK1Q9BXM7 581 aa16.45■□□□□ 0.22
TNXB-205ENST00000486148 POLMQ9NP87 494 aaPredicted RBP16.45■□□□□ 0.22
TNXB-205ENST00000486148 MRPS30Q9NP92 439 aaKnown RBP16.45■□□□□ 0.22
TNXB-205ENST00000486148 CASC3O15234 703 aaKnown RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 PRODHO43272 600 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 IL1AP01583 271 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 TSPAN19P0C672 248 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 ACP2P11117 423 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 ATP5A1P25705 553 aaKnown RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 SDC2P34741 201 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 AP2S1P53680 142 aaPredicted RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 TAS2R41P59536 307 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 GLYR1Q49A26 553 aaPredicted RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 KLHL22Q53GT1 634 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 MRM1Q6IN84 353 aaKnown RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 SLC27A4Q6P1M0 643 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 LAPTM4BQ86VI4 370 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 SFXN5Q8TD22 340 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 OR7D2Q96RA2 312 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 TM9SF2Q99805 663 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 SEMA4GQ9NTN9 838 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 THAP10Q9P2Z0 257 aaPredicted RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 SF3B6Q9Y3B4 125 aaKnown RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 CHST2Q9Y4C5 530 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 A0A0B4J293 547 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 A0A1W2PQL4 384 aaPredicted RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 CPSF4LA6NMK7 179 aaKnown RBP16.44■□□□□ 0.22
TNXB-205ENST00000486148 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 SCAMP1O15126 338 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 GSTM3P21266 225 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 RAB8AP61006 207 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 HOXC5Q00444 222 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 ZNF311Q5JNZ3 666 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 CLEC12AQ5QGZ9 265 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 FAM131AQ6UXB0 335 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 SLC36A4Q6YBV0 504 aa16.44■□□□□ 0.22
TNXB-205ENST00000486148 TTLQ8NG68 377 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms