RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ERV3-1Q14264 604 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 EXOSC7Q15024 291 aaKnown RBP24.44■■□□□ 1.5
SHOX2-204ENST00000483851 ZNHIT3Q15649 155 aaPredicted RBP24.44■■□□□ 1.5
SHOX2-204ENST00000483851 MICAQ29983 383 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF311Q5JNZ3 666 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 COLEC12Q5KU26 742 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 RBM48Q5RL73 367 aaKnown RBP24.44■■□□□ 1.5
SHOX2-204ENST00000483851 RHBDD2Q6NTF9 364 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 TCTN3Q6NUS6 607 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 DGAT2L6Q6ZPD8 337 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 COX18Q8N8Q8 333 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 OR52R1Q8NGF1 315 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 HDAC2Q92769 488 aaKnown RBP24.44■■□□□ 1.5
SHOX2-204ENST00000483851 KIF17Q9P2E2 1029 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 DHCR7Q9UBM7 475 aaKnown RBP24.44■■□□□ 1.5
SHOX2-204ENST00000483851 PCDHGA8Q9Y5G5 932 aa24.44■■□□□ 1.5
SHOX2-204ENST00000483851 KHNYNO15037 678 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 PRAMEF2O60811 474 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 STX11O75558 287 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 TRMUO75648 421 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 YAP1P46937 504 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 OR1D4P47884 311 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 FUT7Q11130 342 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF773Q6PK81 442 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 BPHLQ86WA6 291 aaPredicted RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 PEX5LQ8IYB4 626 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 ATG16L2Q8NAA4 619 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF232Q9UNY5 417 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 THBS1P07996 1170 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 MAOAP21397 527 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 DUSP8Q13202 625 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 PMS2P3Q13401 168 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 DCST2Q5T1A1 773 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 TYW3Q6IPR3 259 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 DBX2Q6ZNG2 339 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 WDR53Q7Z5U6 358 aaPredicted RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 ERI1Q8IV48 349 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 PHF10Q8WUB8 498 aaKnown RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 MKKSQ9NPJ1 570 aaPredicted RBP24.43■■□□□ 1.5
SHOX2-204ENST00000483851 KLHL28Q9NXS3 571 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 SLC13A4Q9UKG4 626 aa24.43■■□□□ 1.5
SHOX2-204ENST00000483851 UGT2B11O75310 529 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 JUNBP17275 347 aaPredicted RBP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 CRHBPP24387 322 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 TTKP33981 857 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 POLR2IP36954 125 aaKnown RBP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 TRA2AQ13595 282 aaKnown RBP eCLIP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 LAIR2Q6ISS4 152 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 OR7G1Q8NGA0 311 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 OR52P1PQ8NH57 321 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 GPR151Q8TDV0 419 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 FBLIM1Q8WUP2 373 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 CNDP2Q96KP4 475 aaKnown RBP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 GFM1Q96RP9 751 aaKnown RBP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 NECTIN3Q9NQS3 549 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 KRT84Q9NSB2 600 aa24.42■■□□□ 1.5
SHOX2-204ENST00000483851 HEMK1Q9Y5R4 338 aaPredicted RBP24.42■■□□□ 1.5
SHOX2-204ENST00000483851 NUP210LQ5VU65 1888 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 IGKV3D-11A0A0A0MRZ8 115 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 LOC100130705A0A1B0GUX0 176 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 J3KTA2 159 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 FCMRO60667 390 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 GRK6P43250 576 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 EMDP50402 254 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ISL1P61371 349 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 POU6F2P78424 691 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF155Q12901 538 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 LARS2Q15031 903 aaKnown RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 KCTD8Q6ZWB6 473 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF619Q8N2I2 560 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 OR10G2Q8NGC3 310 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 CCDC74BQ96LY2 380 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 PTCHD1Q96NR3 888 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ARHGDIGQ99819 225 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ING2Q9H160 280 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 NTN3O00634 580 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 FFAR1O14842 300 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 NME6O75414 186 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ZIC2O95409 532 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 EPPINO95925 133 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 LAPTM4AQ15012 233 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 LPAL2Q16609 132 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 EXOC3L2Q2M3D2 409 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 C6orf141Q5SZD1 244 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF691Q5VV52 312 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 OLIG3Q7RTU3 272 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 DOK1Q99704 481 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 TUBA1CQ9BQE3 449 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 YIPF2Q9BWQ6 316 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 ARRDC1-AS1Q9H2J1 176 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 EVA1AQ9H8M9 152 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 POLR1BQ9H9Y6 1135 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 NMNAT1Q9HAN9 279 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-204ENST00000483851 FOLH1BQ9HBA9 442 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 RARRES3Q9UL19 164 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 HCN4Q9Y3Q4 1203 aa24.41■■□□□ 1.5
SHOX2-204ENST00000483851 AGAP5A6NIR3 686 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 DYRK3O43781 588 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 HYAL3O43820 417 aaPredicted RBP24.4■■□□□ 1.5
SHOX2-204ENST00000483851 OXSR1O95747 527 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms