RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GPR151Q8TDV0 419 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 PIK3R3Q92569 461 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 HGDQ93099 445 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 CHMP6Q96FZ7 201 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 RMND5BQ96G75 393 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 COL21A1Q96P44 957 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 NODALQ96S42 347 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 ADOQ96SZ5 270 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 FAM173AQ9BQD7 235 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 LMF2Q9BU23 707 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 DOHHQ9BU89 302 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 PROK2Q9HC23 129 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 NEUROD4Q9HD90 331 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 SDR39U1Q9NRG7 319 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 CPAMD8Q8IZJ3 1885 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CNTRLQ7Z7A1 2325 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 RNF103-CHMP3A0A140T963 221 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 ANKUB1A6NFN9 424 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 LRRC3CA6NJW4 275 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 DYNC1I1O14576 645 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 UNC5CO95185 931 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CBX6O95503 412 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PGRP06401 933 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 EDN3P14138 238 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 NAGAP17050 411 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 MDH1P40925 334 aaKnown RBP9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PRIM2P49643 509 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CASP9P55211 416 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 STX1BP61266 288 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 RPS26P62854 115 aaKnown RBP9.42□□□□□ -0.9
HDAC6-222ENST00000478095 HSF1Q00613 529 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 FOXO1Q12778 655 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 DUSP5Q16690 384 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 DPY19L1Q2PZI1 675 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 TIGD2Q4W5G0 525 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 ANXA8L1Q5VT79 327 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CGB2Q6NT52 195 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 DNAJC14Q6Y2X3 702 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-222ENST00000478095 SIAH3Q8IW03 269 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CDRT4Q8N9R6 151 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 POGLUT1Q8NBL1 392 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 SLC16A11Q8NCK7 471 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 VPS37AQ8NEZ2 397 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PSMA8Q8TAA3 256 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 SLC35A4Q96G79 324 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 RILPQ96NA2 401 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 OR52E6Q96RD3 313 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 INPP5KQ9BT40 448 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CCDC28BQ9BUN5 200 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 TTTY12Q9BZ98 90 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 METTL7AQ9H8H3 244 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 GALNT9Q9HCQ5 603 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 KLRF1Q9NZS2 232 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 FLRT3Q9NZU0 649 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 ZIM2Q9NZV7 527 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CNIH4Q9P003 139 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 NTMQ9P121 344 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 SEC14L3Q9UDX4 400 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 CBLCQ9ULV8 474 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PCDHGB4Q9UN71 923 aa9.42□□□□□ -0.9
HDAC6-222ENST00000478095 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.42□□□□□ -0.9
HDAC6-222ENST00000478095 PRAMEF25A6NGN4 478 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 OR6C70A6NIJ9 312 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 C17orf51A8MQB3 221 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ACOT7O00154 380 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 TSPAN2O60636 221 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ICOSLGO75144 302 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 PDE9AO76083 593 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 NKX2-2O95096 273 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 C1QCP02747 245 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 GSNP06396 782 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CELA3AP09093 270 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ALOX5P09917 674 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CYP4B1P13584 511 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 NCF2P19878 526 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 PTGDSP41222 190 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CASP3P42574 277 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CDKN2CP42773 168 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 MAGEA5P43359 124 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ZFP36L2P47974 494 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 POLR2JP52435 117 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 PPIAP62937 165 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 RPP38P78345 283 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 MRPS22P82650 360 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 DECR1Q16698 335 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 EIF2S3LQ2VIR3 472 aaKnown RBP9.41□□□□□ -0.9
HDAC6-222ENST00000478095 VPS26BQ4G0F5 336 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CYP27C1Q4G0S4 372 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CMPK2Q5EBM0 449 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 CCNJQ5T5M9 372 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 GFRALQ6UXV0 394 aa9.41□□□□□ -0.9
HDAC6-222ENST00000478095 NUP54Q7Z3B4 507 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms