RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 RANBP3LQ86VV4 465 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 RBM45Q8IUH3 476 aaKnown RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 VWA5B2Q8N398 1253 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 COX18Q8N8Q8 333 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 MORN4Q8NDC4 146 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 OR4K5Q8NGD3 323 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 OR8J1Q8NGP2 316 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 GNPDA2Q8TDQ7 276 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 OIT3Q8WWZ8 545 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 SLC35B4Q969S0 331 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 MVB12AQ96EY5 273 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CRELD1Q96HD1 420 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 MAP3K3Q99759 626 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ACOT13Q9NPJ3 140 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 MAN2C1Q9NTJ4 1040 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ZNF226Q9NYT6 803 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ENPP5Q9UJA9 477 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 SYNDIG1LA6NDD5 238 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 KIAA0513O60268 411 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 NKX2-2O95096 273 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 CDK1P06493 297 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 PCSK6P29122 969 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 HSD17B7P56937 341 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 GPLD1P80108 840 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 ZP2Q05996 745 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 MGAT2Q10469 447 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 GRM7Q14831 915 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 DECR1Q16698 335 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 DCST2Q5T1A1 773 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 MEDAGQ5VYS4 303 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 C12orf73Q69YU5 71 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 C11orf74Q86VG3 221 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 OR4N5Q8IXE1 308 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 OR9A4Q8NGU2 314 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 DIO2Q92813 273 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 LMF2Q9BU23 707 aaKnown RBP20.31■□□□□ 0.84
CCM2-206ENST00000474617 TEX12Q9BXU0 123 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 RACGAP1Q9H0H5 632 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 ADAP2Q9NPF8 381 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 NECTIN3Q9NQS3 549 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 C14orf105Q9NVL8 296 aa20.31■□□□□ 0.84
CCM2-206ENST00000474617 COLQQ9Y215 455 aaPredicted RBP20.31■□□□□ 0.84
CCM2-206ENST00000474617 SLC22A1O15245 554 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 BCAT2O15382 392 aaPredicted RBP20.3■□□□□ 0.84
CCM2-206ENST00000474617 LDB3O75112 727 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 MT-ND2P03891 347 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 POU2F1P14859 743 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 GABRA4P48169 554 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 POU6F2P78424 691 aaPredicted RBP20.3■□□□□ 0.84
CCM2-206ENST00000474617 SERTAD2Q14140 314 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 TRMT12Q53H54 448 aaKnown RBP20.3■□□□□ 0.84
CCM2-206ENST00000474617 AHSA2Q719I0 299 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 RRM2BQ7LG56 351 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 GALNT12Q8IXK2 581 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 OR5T3Q8NGG3 340 aa20.3■□□□□ 0.84
CCM2-206ENST00000474617 ACOT11Q8WXI4 607 aaPredicted RBP20.3■□□□□ 0.84
CCM2-206ENST00000474617 GABARAPO95166 117 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 MSL3P1P0C860 447 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 NID1P14543 1247 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 PTGER1P34995 402 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 RGS19P49795 217 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 GP2P55259 537 aaKnown RBP20.29■□□□□ 0.84
CCM2-206ENST00000474617 SNRPNP63162 240 aaKnown RBP20.29■□□□□ 0.84
CCM2-206ENST00000474617 STX4Q12846 297 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 NR1D2Q14995 579 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 LAIR1Q6GTX8 287 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 VRK2Q86Y07 508 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 KMT5CQ86Y97 462 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 PLXDC1Q8IUK5 500 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 PIGXQ8TBF5 258 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 SGCDQ92629 289 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 RBM18Q96H35 190 aaKnown RBP20.29■□□□□ 0.84
CCM2-206ENST00000474617 FUNDC2Q9BWH2 189 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 SLC25A19Q9HC21 320 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 SIT1Q9Y3P8 196 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 UNC80Q8N2C7 3258 aa20.29■□□□□ 0.84
CCM2-206ENST00000474617 SNTNA6NMZ2 147 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 H3BN98 237 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 K7ESF4 209 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 DNAJB6O75190 326 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 CNR2P34972 360 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 SOX18P35713 384 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 SMSP52788 366 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 PSMD4P55036 377 aaKnown RBP20.28■□□□□ 0.84
CCM2-206ENST00000474617 EEF1A1P68104 462 aaKnown RBP20.28■□□□□ 0.84
CCM2-206ENST00000474617 NFATC3Q12968 1075 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 TSPAN31Q12999 210 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 OCLNQ16625 522 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 SMN1Q16637 294 aaKnown RBP20.28■□□□□ 0.84
CCM2-206ENST00000474617 TMEM44Q2T9K0 475 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 YOD1Q5VVQ6 348 aaPredicted RBP20.28■□□□□ 0.84
CCM2-206ENST00000474617 PLEKHM3Q6ZWE6 761 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 COMTD1Q86VU5 262 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 CCDC103Q8IW40 242 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 DEFB119Q8N690 84 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 TMEM52Q8NDY8 209 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 DTNBP1Q96EV8 351 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 AHCYL2Q96HN2 611 aaKnown RBP20.28■□□□□ 0.84
CCM2-206ENST00000474617 CDCA4Q9BXL8 241 aa20.28■□□□□ 0.84
CCM2-206ENST00000474617 SOHLH2Q9NX45 425 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms