RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FLYWCH1Q4VC44 716 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 FAM71E1Q6IPT2 247 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 POMZP3Q6PJE2 187 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 NPSR1Q6W5P4 371 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 TRIM42Q8IWZ5 723 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 HOMEZQ8IX15 550 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 GSPT2Q8IYD1 628 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 CCDC63Q8NA47 563 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 RNF138Q8WVD3 245 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 TRIM44Q96DX7 344 aaPredicted RBP18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 TM9SF2Q99805 663 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 POLDIP3Q9BY77 421 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 ACBD3Q9H3P7 528 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 OXSMQ9NWU1 459 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 CRIM1Q9NZV1 1036 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 MID2Q9UJV3 735 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 MPDZO75970 2070 aa18.51■□□□□ 0.55
PDLIM4-206ENST00000474421 KIAA1549Q9HCM3 1950 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 PLOD2O00469 737 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 COPEO14579 308 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 JUNP05412 331 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 TMIGD3P0DMS9 266 aaPredicted RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 CPA3P15088 417 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 GRK2P25098 689 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 DNAJA1P31689 397 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 SLCO1A2P46721 670 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 DGKQP52824 942 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 GFRA1P56159 465 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 EEF1A1P68104 462 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 CYP27C1Q4G0S4 372 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 EEF1A1P5Q5VTE0 462 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 NOXRED1Q6NXP6 359 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 UCN2Q96RP3 112 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 DKKL1Q9UK85 242 aa18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 MRTO4Q9UKD2 239 aaKnown RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 C19orf53Q9UNZ5 99 aaPredicted RBP18.5■□□□□ 0.55
PDLIM4-206ENST00000474421 AKAP6Q13023 2319 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 SHBGP04278 402 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 IFI6P09912 130 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 CHMP24386 653 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 ZNHIT3Q15649 155 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 LIPMQ5VYY2 423 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 TMEM107Q6UX40 140 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 C9orf106Q8NAJ2 232 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 OR4K17Q8NGC6 315 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 NINJ1Q92982 152 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 WNT2BQ93097 391 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 EFHD2Q96C19 240 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 SFXN2Q96NB2 322 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 TUBA1CQ9BQE3 449 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 SFXN3Q9BWM7 321 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 CLEC4MQ9H2X3 399 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 SDHAF3Q9NRP4 125 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 RASSF1Q9NS23 344 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 DDX18Q9NVP1 670 aaKnown RBP18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 FBXL2Q9UKC9 423 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 ABCG2Q9UNQ0 655 aa18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 POLR3HQ9Y535 204 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-206ENST00000474421 EEF1E1-BLOC1S5C9J1V9 151 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 SLC28A1O00337 649 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 EEF1E1O43324 174 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 NME6O75414 186 aaPredicted RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 RCBTB2O95199 551 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 KRT4P19013 534 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 PRPH2P23942 346 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 DPP4P27487 766 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 EVI2BP34910 448 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 MC3RP41968 323 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 ART1P52961 327 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 GAS1P54826 345 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 PSMD4P55036 377 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 RIPPLY3P57055 190 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 SORDQ00796 357 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 PSG6Q00889 435 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 SRYQ05066 204 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 SNTB1Q13884 538 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 DECR1Q16698 335 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 ADGRE4PQ86SQ3 457 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 OR2L13Q8N349 312 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 OR4N2Q8NGD1 307 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 AMDHD1Q96NU7 426 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 GPATCH1Q9BRR8 931 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 TRMOQ9BU70 441 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 IQCGQ9H095 443 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 GLIPR2Q9H4G4 154 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 Q9N2J8 555 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 JKAMPQ9P055 326 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 PPP4R1LQ9P1A2 415 aa18.48■□□□□ 0.55
PDLIM4-206ENST00000474421 FAM221AA4D161 298 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 TUBAL3A6NHL2 446 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 SMIM23A6NLE4 172 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 TTC36A6NLP5 189 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 A6NNC1 897 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 NPIPB8E9PQR5 432 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 RGS14O43566 566 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 SEC22BO75396 215 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 CLK3P49761 638 aaKnown RBP18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 LHX2P50458 406 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms