RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TYROBPO43914 113 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 TRIM3O75382 744 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 LYPLA1O75608 230 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SERPINE1P05121 402 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 EFNA1P20827 205 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 GRNP28799 593 aaKnown RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 CHRNB4P30926 498 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 NUP107P57740 925 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ABCE1P61221 599 aaKnown RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 STX5Q13190 355 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SNTA1Q13424 505 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 RCAN2Q14206 197 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SF3B4Q15427 424 aaKnown RBP eCLIP10.54□□□□□ -0.728e-19■■■■■ 38.5
CPNE1-222ENST00000473373 CEBPEQ15744 281 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF630Q2M218 657 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 WIPI1Q5MNZ9 446 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 LRIG3Q6UXM1 1119 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 Q6ZSR9 355 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 WDR53Q7Z5U6 358 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 YRDCQ86U90 279 aaKnown RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 CHERPQ8IWX8 916 aaKnown RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 PM20D2Q8IYS1 436 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 NUP43Q8NFH3 380 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 FBXO30Q8TB52 745 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 GPR151Q8TDV0 419 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ELP4Q96EB1 424 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 VSTM2LQ96N03 204 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 DMRTA2Q96SC8 542 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 TUBB1Q9H4B7 451 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 PROK2Q9HC23 129 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ACKR4Q9NPB9 350 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 KCNJ16Q9NPI9 418 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SDHAF3Q9NRP4 125 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ATAD3AQ9NVI7 634 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 SPRR3Q9UBC9 169 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 ZDHHC2Q9UIJ5 367 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 CBLCQ9ULV8 474 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 C19orf53Q9UNZ5 99 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-222ENST00000473373 RNF6Q9Y252 685 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
CPNE1-222ENST00000473373 MED12Q93074 2177 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 A0A1B0GVC2 190 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 UPK1AO00322 258 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 SNPHO15079 494 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 TO15178 435 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 BIRC5O15392 142 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CBR3O75828 277 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 HOXD4P09016 255 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CT45A8P0DMV1 189 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CT45A9P0DMV2 189 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 PRPS2P11908 318 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 BCKDHAP12694 445 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 HPGDP15428 266 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 BGNP21810 368 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 GABRA3P34903 492 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 SOAT1P35610 550 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 ZFP36L2P47974 494 aaKnown RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 SLC1A6P48664 564 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CDK9P50750 372 aaKnown RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 PNLIPRP2P54317 469 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 PRR5P85299 388 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 SRYQ05066 204 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 STX3Q13277 289 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 KIAA0040Q15053 153 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 EIPR1Q53HC9 387 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CT45A2Q5DJT8 189 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CPTPQ5TA50 214 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 IL23RQ5VWK5 629 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 TIGD3Q6B0B8 471 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 OR5M10Q6IEU7 315 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 ENPP6Q6UWR7 440 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 NPSR1Q6W5P4 371 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 RNF165Q6ZSG1 346 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CHMP1BQ7LBR1 199 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 IFNEQ86WN2 208 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CCDC71Q8IV32 467 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 KIRREL3Q8IZU9 778 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 OR4N2Q8NGD1 307 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 HGDQ93099 445 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 ABTB1Q969K4 478 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 MTERF3Q96E29 417 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 LRRC46Q96FV0 321 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 RMND5BQ96G75 393 aaPredicted RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 TBL1XR1Q9BZK7 514 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 SSU72Q9NP77 194 aaKnown RBP10.53□□□□□ -0.72
CPNE1-222ENST00000473373 NKIRAS1Q9NYS0 192 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 TAS2R7Q9NYW3 318 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CCL27Q9Y4X3 112 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 CSMD1Q96PZ7 3565 aa10.53□□□□□ -0.72
CPNE1-222ENST00000473373 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.72
CPNE1-222ENST00000473373 UQCRHLA0A096LP55 91 aa10.52□□□□□ -0.73
CPNE1-222ENST00000473373 A0A1W2PRB8 838 aa10.52□□□□□ -0.73
CPNE1-222ENST00000473373 NKX2-6A6NCS4 301 aa10.52□□□□□ -0.73
CPNE1-222ENST00000473373 TTC36A6NLP5 189 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms