RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PLCXD2Q0VAA5 305 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 GALNT1Q10472 559 aaPredicted RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 GTF2H2Q13888 395 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 SLC48A1Q6P1K1 146 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 GTF2H2CQ6P1K8 395 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 NPSR1Q6W5P4 371 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 C3orf62Q6ZUJ4 267 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 SH2D5Q6ZV89 423 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 RPS27LQ71UM5 84 aaKnown RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 P4HA3Q7Z4N8 544 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 CCDC116Q8IYX3 515 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 OR4N2Q8NGD1 307 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 OR52R1Q8NGF1 315 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 OR5M1Q8NGP8 315 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 PYROXD1Q8WU10 500 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 CNRIP1Q96F85 164 aaPredicted RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 SFXN2Q96NB2 322 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 ADOQ96SZ5 270 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 BRINP2Q9C0B6 783 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 NMRAL1Q9HBL8 299 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 ZBTB26Q9HCK0 441 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 FARSBQ9NSD9 589 aaKnown RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 FLRT3Q9NZU0 649 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 ZNF337Q9Y3M9 751 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 EXPH5Q8NEV8 1989 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 OR6C70A6NIJ9 312 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 SLC22A20A6NK97 555 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 EFCAB8A8MWE9 144 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 C16orf97H3BN30 126 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 ACOX3O15254 700 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 EMC8O43402 210 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 SPRY1O43609 319 aaPredicted RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 CDH16O75309 829 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 REM1O75628 298 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 AQP8O94778 261 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 C2P06681 752 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 CRHP06850 196 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 LTA4HP09960 611 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 KRT15P19012 456 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 DPP4P27487 766 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 RPS4XP62701 263 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 TRADDQ15628 312 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 BCL2A1Q16548 175 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 PRSS53Q2L4Q9 553 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 BEX5Q5H9J7 111 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 CCNYL2Q5T2Q4 361 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 ZNF704Q6ZNC4 412 aaPredicted RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 UBQLNLQ8IYU4 475 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 METTL4Q8N3J2 472 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 FADS6Q8N9I5 356 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 FNDC9Q8TBE3 224 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 SLC35A4Q96G79 324 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 NSUN5Q96P11 429 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 COL21A1Q96P44 957 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 CENPKQ9BS16 269 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 TMEM204Q9BSN7 226 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 KLHL4Q9C0H6 718 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 DSN1Q9H410 356 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 NOL11Q9H8H0 719 aaKnown RBP8.37□□□□□ -1.07
VCL-204ENST00000472585 RNF122Q9H9V4 155 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 WDR41Q9HAD4 459 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 SAYSD1Q9NPB0 183 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 ELOVL5Q9NYP7 299 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 LAMP3Q9UQV4 416 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 ACOT9Q9Y305 439 aa8.37□□□□□ -1.07
VCL-204ENST00000472585 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 SHISA8B8ZZ34 492 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 OVOL3O00110 214 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 HS3ST1O14792 307 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 UGDHO60701 494 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 NDUFS7O75251 213 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ERAL1O75616 437 aaKnown RBP8.36□□□□□ -1.07
VCL-204ENST00000472585 SEMA3DO95025 777 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 CLDN9O95484 217 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 THBS1P07996 1170 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 CD8BP10966 210 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 TBXA2RP21731 343 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 GRK2P25098 689 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 SPRP35270 261 aaPredicted RBP8.36□□□□□ -1.07
VCL-204ENST00000472585 SLC6A8P48029 635 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ALDH18A1P54886 795 aaKnown RBP8.36□□□□□ -1.07
VCL-204ENST00000472585 TRAF3Q13114 568 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 SGO1Q5FBB7 561 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 UBAP2Q5T6F2 1119 aaKnown RBP8.36□□□□□ -1.07
VCL-204ENST00000472585 GRTP1Q5TC63 336 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 FRG2Q64ET8 278 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 OR2A2Q6IF42 318 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 AAGABQ6PD74 315 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 STAC2Q6ZMT1 411 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 RAPH1Q70E73 1250 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
VCL-204ENST00000472585 COMMD6Q7Z4G1 85 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms