RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-215	ENST00000472096	QPCTL	Q9NXS2	382 aa		13.79	□□□□□ -0.2
CALD1-215	ENST00000472096	OR14I1	A6ND48	311 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	PRAMEF25	A6NGN4	478 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	AQP7	O14520	342 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	ADAM10	O14672	748 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	TSPAN2	O60636	221 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	HCN1	O60741	890 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	REM1	O75628	298 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	DDX5	P17844	614 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	ENDOU	P21128	410 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	GDF1	P27539	372 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	IL12B	P29460	328 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	GPC1	P35052	558 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	MASP1	P48740	699 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	CDK9	P50750	372 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	MAD2L1	Q13257	205 aa	Predicted RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	SLC10A1	Q14973	349 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	HIST2H2BC	Q6DN03	193 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	RPTN	Q6XPR3	784 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	C3P1	Q6ZMU1	363 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	EID3	Q8N140	333 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	OR7A2P	Q8NGA2	310 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	OR4N2	Q8NGD1	307 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	PHF10	Q8WUB8	498 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	HPS1	Q92902	700 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	ITPKC	Q96DU7	683 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	DMRTA2	Q96SC8	542 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	LMF2	Q9BU23	707 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	ASIC5	Q9NY37	505 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	NKIRAS1	Q9NYS0	192 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	NOP53	Q9NZM5	478 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	KLRF1	Q9NZS2	232 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	EIF3L	Q9Y262	564 aa	Known RBP	13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	C15orf41	Q9Y2V0	281 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	OR10H1	Q9Y4A9	318 aa		13.78	□□□□□ -0.2
CALD1-215	ENST00000472096	TRGV5	A0A0B4J1U4	118 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	NPIPA2	E9PIF3	369 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096		E9PLN8	166 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	NPIPA3	F8WFD2	350 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SUSD5	O60279	629 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	EFNA1	P20827	205 aa	Predicted RBP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	KRT20	P35900	424 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	MAN2A2	P49641	1150 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	MANF	P55145	182 aa	Known RBP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	EMX2	Q04743	252 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SNTA1	Q13424	505 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	EFR3A	Q14156	821 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SMU1	Q2TAY7	513 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	EMC4	Q5J8M3	183 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	AGBL2	Q5U5Z8	902 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SLC30A6	Q6NXT4	461 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	ANGPTL8	Q6UXH0	198 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	MRGPRG	Q86SM5	289 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	KRTCAP2	Q8N6L1	136 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	RNF138	Q8WVD3	245 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	MED12	Q93074	2177 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	EFHD2	Q96C19	240 aa	Predicted RBP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	TMCO6	Q96DC7	493 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	MS4A4E	Q96PG1	132 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	ADO	Q96SZ5	270 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	VKORC1	Q9BQB6	163 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SLC6A15	Q9H2J7	730 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	UBQLN3	Q9H347	655 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	TP63	Q9H3D4	680 aa	Predicted RBP	13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	PCNX3	Q9H6A9	2034 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	LDAH	Q9H6V9	325 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	AKTIP	Q9H8T0	292 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	ZFAND3	Q9H8U3	227 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	GALNT9	Q9HCQ5	603 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	ACKR4	Q9NPB9	350 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	SPRR3	Q9UBC9	169 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	HRH3	Q9Y5N1	445 aa		13.77	□□□□□ -0.21
CALD1-215	ENST00000472096	CYSRT1	A8MQ03	144 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	GNB5	O14775	395 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	BCKDK	O14874	412 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	ICOSLG	O75144	302 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	SNN	O75324	88 aa	Predicted RBP	13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	LAMP1	P11279	417 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	G6PD	P11413	515 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	ELAVL4	P26378	380 aa	Known RBP	13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	PTPN6	P29350	595 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	PNLIPRP2	P54317	469 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	C21orf58	P58505	322 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	MLC1	Q15049	377 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	ZNHIT3	Q15649	155 aa	Predicted RBP	13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	TIGD3	Q6B0B8	471 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	SZRD1	Q7Z422	152 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	RIMKLA	Q8IXN7	391 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	RAB3IL1	Q8TBN0	382 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	HOXB13	Q92826	284 aa	Predicted RBP	13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	ARL8A	Q96BM9	186 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	SARAF	Q96BY9	339 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	NUF2	Q9BZD4	464 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	EXO5	Q9H790	373 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	MEAF6	Q9HAF1	191 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096		Q9N2J8	555 aa		13.76	□□□□□ -0.21

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