RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 FRG2CA6NGY1 282 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 UPK1AO00322 258 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ACOX3O15254 700 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 COQ9O75208 318 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 SNUPNO95149 360 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 CT45A8P0DMV1 189 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 CT45A9P0DMV2 189 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 PRPS2P11908 318 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 NAGAP17050 411 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 EFNA1P20827 205 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 CASP3P42574 277 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ZFP36L2P47974 494 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 CORO7P57737 925 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 NUP107P57740 925 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ZNF155Q12901 538 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 HSPB3Q12988 150 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 TESK1Q15569 626 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 CT45A2Q5DJT8 189 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 TBCELQ5QJ74 424 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 OR7A2PQ8NGA2 310 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ZFP28Q8NHY6 868 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 LDAHQ9H6V9 325 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 METTL7AQ9H8H3 244 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 AKTIPQ9H8T0 292 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 OR10H1Q9Y4A9 318 aa12.87□□□□□ -0.35
CCHCR1-211ENST00000467553 FREM3P0C091 2139 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 A0A087WV62 115 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 TRGV5A0A0B4J1U4 118 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ANKRD33BA6NCL7 494 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 C2orf72A6NCS6 295 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 PLOD2O00469 737 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 TBX19O60806 448 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 UGT2B11O75310 529 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 SLITRK5O94991 958 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 RFPL3SP0C7P2 107 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 DDX5P17844 614 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 KRT20P35900 424 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 HPCAL1P37235 193 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 MASP1P48740 699 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 SLC18A1P54219 525 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 PRKAG1P54619 331 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 EMX2Q04743 252 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 MAD2L1Q13257 205 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 PDE7AQ13946 482 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 PTGR1Q14914 329 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 SF3B4Q15427 424 aaKnown RBP eCLIP12.86□□□□□ -0.357e-7■■□□□ 13.6
CCHCR1-211ENST00000467553 SLC25A35Q3KQZ1 300 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 WDR53Q7Z5U6 358 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 OR4N2Q8NGD1 307 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 RILPQ96NA2 401 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 NODALQ96S42 347 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 SECISBP2Q96T21 854 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ZNF559Q9BR84 538 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 EXO5Q9H790 373 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ACAD8Q9UKU7 415 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
CCHCR1-211ENST00000467553 FAM90A27PA6NNH2 459 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 GNB5O14775 395 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 SCAMP2O15127 329 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 TO15178 435 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 SNX4O95219 450 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 CELA3AP09093 270 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 GLI4P10075 376 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 KITP10721 976 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 LAMP1P11279 417 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 G6PDP11413 515 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 CD1EP15812 388 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 IL12BP29460 328 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 RPL3P39023 403 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 CPTPQ5TA50 214 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 RIPPLY2Q5TAB7 128 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCHCR1-211ENST00000467553 HDXQ7Z353 690 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms