RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 HSPBAP1Q96EW2 488 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 C10orf90Q96M02 699 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 COL21A1Q96P44 957 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 KCNC2Q96PR1 638 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 SPATA5L1Q9BVQ7 753 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 REXO4Q9GZR2 422 aaKnown RBP9.39□□□□□ -0.91
PMF1-204ENST00000466489 SPNS1Q9H2V7 528 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 TMEM38AQ9H6F2 299 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 WDR54Q9H977 334 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 MKKSQ9NPJ1 570 aaPredicted RBP9.39□□□□□ -0.91
PMF1-204ENST00000466489 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 RHBDL2Q9NX52 303 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 TRPC4Q9UBN4 977 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 SPACA6W5XKT8 324 aa9.39□□□□□ -0.91
PMF1-204ENST00000466489 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 A0A0A6YYC8 382 aaPredicted RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 LRIT2A6NDA9 550 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CLCA1A8K7I4 914 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 I3L1I5 382 aaPredicted RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 ERI3O43414 337 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 B3GALT2O43825 422 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 FAM20BO75063 409 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 KLHL18O94889 574 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 IGHEP01854 428 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 STATHP02808 62 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ZNF888P0CJ79 500 aaPredicted RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 ATXN8OSP0DMR3 200 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 PCMT1P22061 227 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 PCGF2P35227 344 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 TSFMP43897 325 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 GCGRP47871 477 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 OR1D4P47884 311 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ARFIP1P53367 373 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SELENOWP63302 87 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 TLE3Q04726 772 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 NPRL3Q12980 569 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CBX3Q13185 183 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 PTGR1Q14914 329 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CTF1Q16619 201 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 TMEM44Q2T9K0 475 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ZIK1Q3SY52 487 aaPredicted RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 DEFB134Q4QY38 66 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 AGAP7PQ5VUJ5 663 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 MEDAGQ5VYS4 303 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ZNF621Q6ZSS3 439 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CCDC80Q76M96 950 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 VASH2Q86V25 355 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 RAB43Q86YS6 212 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ARMC8Q8IUR7 673 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SCAIQ8N9R8 606 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 KCT2Q8NC54 265 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 HUS1BQ8NHY5 278 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SETD6Q8TBK2 473 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 ADAMTS18Q8TE60 1221 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CREB3L4Q8TEY5 395 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 RNF31Q96EP0 1072 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 IP6K3Q96PC2 410 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CDK15Q96Q40 435 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 MBOAT4Q96T53 435 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 MTERF1Q99551 399 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 AMBRA1Q9C0C7 1298 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 CCDC59Q9P031 241 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 PDP1Q9P0J1 537 aaPredicted RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 SLAMF8Q9P0V8 285 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 DAPK2Q9UIK4 370 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 FARSAQ9Y285 508 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 MRPS33Q9Y291 106 aaKnown RBP9.38□□□□□ -0.91
PMF1-204ENST00000466489 PCDHGA6Q9Y5G7 932 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 PTGDR2Q9Y5Y4 395 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
PMF1-204ENST00000466489 NUP210LQ5VU65 1888 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 LOC101059948A0A1B0GTJ6 334 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 FFAR3O14843 346 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 PCDH17O14917 1159 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 GPR42O15529 346 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 GALR3O60755 368 aaPredicted RBP9.37□□□□□ -0.91
PMF1-204ENST00000466489 SEMA3DO95025 777 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 NADKO95544 446 aaPredicted RBP9.37□□□□□ -0.91
PMF1-204ENST00000466489 OXSR1O95747 527 aaPredicted RBP9.37□□□□□ -0.91
PMF1-204ENST00000466489 ONECUT2O95948 504 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 RECKO95980 971 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 PDYNP01213 254 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 CTSBP07858 339 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 CYC1P08574 325 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 CD22P20273 847 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 S100A1P23297 94 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 ACVR2AP27037 513 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 ELK4P28324 431 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 IFNA8P32881 189 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 SSR2P43308 183 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 PCYT1AP49585 367 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 GZMMP51124 257 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 HMGA2P52926 109 aa9.37□□□□□ -0.91
PMF1-204ENST00000466489 RAB8AP61006 207 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms