RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ASCL1P50553 236 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 GAS1P54826 345 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 GFRA1P56159 465 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 CORO7P57737 925 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 PSG6Q00889 435 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 BCL2A1Q16548 175 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 ERCC6LQ2NKX8 1250 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 CYP27C1Q4G0S4 372 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 CFAP157Q5JU67 520 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 DCST1Q5T197 706 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 NOXRED1Q6NXP6 359 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 WDR53Q7Z5U6 358 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-207ENST00000461798 CDH24Q86UP0 819 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
BRCA1-207ENST00000461798 RELL2Q8NC24 303 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-207ENST00000461798 RNASE6Q93091 150 aaKnown RBP8.33□□□□□ -1.08
BRCA1-207ENST00000461798 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 FCRL1Q96LA6 429 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 BBS4Q96RK4 519 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 ADOQ96SZ5 270 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 SH3GL2Q99962 352 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
BRCA1-207ENST00000461798 TRMOQ9BU70 441 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 EBPLQ9BY08 206 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 GALNT9Q9HCQ5 603 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 SERHLQ9NQF3 203 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 KLRF1Q9NZS2 232 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 JKAMPQ9P055 326 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 CAMK2AQ9UQM7 478 aa8.33□□□□□ -1.08
BRCA1-207ENST00000461798 F8P00451 2351 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 TTC36A6NLP5 189 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 UPK1AO00322 258 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 SLC28A1O00337 649 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 COPEO14579 308 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 FADS1O60427 444 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 ZIC3O60481 467 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 TBX19O60806 448 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 COQ9O75208 318 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 NME6O75414 186 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 CTAG2O75638 210 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 FGF4P08620 206 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 KRT4P19013 534 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 CHMP24386 653 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 CTSSP25774 331 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 OPRM1P35372 400 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 KRT20P35900 424 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 KIR2DL3P43628 341 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 SLCO1A2P46721 670 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 NCBP2P52298 156 aaKnown RBP eCLIP8.32□□□□□ -1.085e-10■■■■■ 33.9
BRCA1-207ENST00000461798 ZNF136P52737 540 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 EEF1A1P68104 462 aaKnown RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 DAZAP2Q15038 168 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 TOMM20Q15388 145 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 IMPG1Q17R60 797 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 EEF1A1P5Q5VTE0 462 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 LIPMQ5VYY2 423 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 Q6ZSR9 355 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 LARP4Q71RC2 724 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 SLC44A2Q8IWA5 706 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 TRIM42Q8IWZ5 723 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 OR2L13Q8N349 312 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 OR4N2Q8NGD1 307 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 UBLCP1Q8WVY7 318 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 HOXB13Q92826 284 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 ELP4Q96EB1 424 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 ZFP3Q96NJ6 502 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 AMDHD1Q96NU7 426 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 GATA5Q9BWX5 397 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 GLIPR2Q9H4G4 154 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 MIEF1Q9NQG6 463 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 MKS1Q9NXB0 559 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 TAS2R10Q9NYW0 307 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 MID2Q9UJV3 735 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 MAPRE3Q9UPY8 281 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
BRCA1-207ENST00000461798 ANKHD1Q8IWZ3 2542 aaKnown RBP8.32□□□□□ -1.08
BRCA1-207ENST00000461798 NCKAP5O14513 1909 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 B4DXG7 233 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 AZIN1O14977 448 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 RGS14O43566 566 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TRIM13O60858 407 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 SEC22BO75396 215 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 CRCPO75575 148 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 RCBTB2O95199 551 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 ZWINTO95229 277 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 JUNP05412 331 aaKnown RBP8.31□□□□□ -1.08
BRCA1-207ENST00000461798 NUDT17P0C025 328 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 CYP4B1P13584 511 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 BMP5P22003 454 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 GRK2P25098 689 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 TACR1P25103 407 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 MAP3K8P41279 467 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 MC3RP41968 323 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 LHX2P50458 406 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 WNT3P56703 355 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 B3GALT5-AS1P59052 145 aa8.31□□□□□ -1.08
BRCA1-207ENST00000461798 MYBPHQ13203 477 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms