RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CHMP6Q96FZ7 201 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 PHF12Q96QT6 1004 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 PANX1Q96RD7 426 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 NPHS2Q9NP85 383 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ASF1BQ9NVP2 202 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 KLRF1Q9NZS2 232 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 AP3M1Q9Y2T2 418 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 A0A1B0GUH1 482 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 RFXANKO14593 260 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 CCDC22O60826 627 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 CPSF4O95639 269 aaKnown RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 GABRA3P34903 492 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 WNT3P56703 355 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 HPCAP84074 193 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 GANABQ14697 944 aaKnown RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 PRSS53Q2L4Q9 553 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 METTL25Q8N6Q8 603 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 TMBIM1Q969X1 311 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 CXorf36Q9H7Y0 433 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 LEF1Q9UJU2 399 aaPredicted RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 A0A1W2PQD3 144 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ANKUB1A6NFN9 424 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 CCDC154A6NI56 674 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 BCKDKO14874 412 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 SNPHO15079 494 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 PRKAG1P54619 331 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 PSG6Q00889 435 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 COQ5Q5HYK3 327 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 FAM219BQ5XKK7 198 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 SAXO2Q658L1 398 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 GFRALQ6UXV0 394 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ZNF227Q86WZ6 799 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 CPSF7Q8N684 471 aaKnown RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 TOR1AIP2Q8NFQ8 470 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 SLC9A6Q92581 669 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ANKRD10Q9NXR5 420 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 SUCOQ9UBS9 1254 aaKnown RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 A0A096LPI6 279 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 BBIP1A8MTZ0 92 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GLSO94925 669 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 CCL3P10147 92 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 PPIAP62937 165 aaKnown RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 RCAN2Q14206 197 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GLYR1Q49A26 553 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 COLEC12Q5KU26 742 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 NPSR1Q6W5P4 371 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 C6orf120Q7Z4R8 191 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 CHDHQ8NE62 594 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 OR10G3Q8NGC4 313 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 FAM110BQ8TC76 370 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 JADE3Q92613 823 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SARAFQ96BY9 339 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GIMAP5Q96F15 307 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TMEM120AQ9BXJ8 343 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 ACKR4Q9NPB9 350 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 STOML1Q9UBI4 398 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 CACNA1GO43497 2377 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 A0A0G2JND7 137 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SCN2BO60939 215 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TRIM3O75382 744 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 HMGN2P05204 90 aaKnown RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 HPGDP15428 266 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 PTGER4P35408 488 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 HBA1P69905 142 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 FADDQ13158 208 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SPDL1Q96EA4 605 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TBL1XR1Q9BZK7 514 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 PTGES2Q9H7Z7 377 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 EVA1AQ9H8M9 152 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 LIN28AQ9H9Z2 209 aaKnown RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 UBQLN4Q9NRR5 601 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 CSAG2Q9Y5P2 127 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 F10P00742 488 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 ACP2P11117 423 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 MATN1P21941 496 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SOX18P35713 384 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SUMO3P55854 103 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 FBXW4P57775 412 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 LASP1Q14847 261 aaKnown RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 SLC10A1Q14973 349 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 ARHGAP11AQ6P4F7 1023 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SIAH3Q8IW03 269 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 OR1J4Q8NGS1 313 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 NTNG2Q96CW9 530 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 SLC35A5Q9BS91 424 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TTTY12Q9BZ98 90 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 ZDHHC11Q9H8X9 412 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 EQTNQ9NQ60 294 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 FGFR1OP2Q9NVK5 253 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 C15orf41Q9Y2V0 281 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GMEB1Q9Y692 573 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 A0A087WZY1 265 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 IGHG3P01860 377 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 NCF2P19878 526 aaPredicted RBP9.82□□□□□ -0.84
UBR4-208ENST00000459947 CASP3P42574 277 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 TDGF1P3P51864 188 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 GUCY1A3Q02108 690 aa9.82□□□□□ -0.84
UBR4-208ENST00000459947 KCNC4Q03721 635 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms