RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 MTMR12Q9C0I1 747 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 IL22Q9GZX6 179 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 FAM49AQ9H0Q0 323 aaPredicted RBP3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 C1orf21Q9H246 121 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 MINDY3Q9H8M7 445 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 DMAP1Q9NPF5 467 aaPredicted RBP3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 MRPL40Q9NQ50 206 aaKnown RBP3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 PFDN4Q9NQP4 134 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 SAR1AQ9NR31 198 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 ABCC13Q9NSE7 274 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 FGFR1OP2Q9NVK5 253 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 NUDT4Q9NZJ9 180 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 THEGQ9P2T0 379 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 TRIM10Q9UDY6 481 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 ANAPC5Q9UJX4 755 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 TSPAN16Q9UKR8 245 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 DNPEPQ9ULA0 475 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 TMCO1Q9UM00 188 aa3.06□□□□□ -1.92
SSX2IP-204ENST00000459708 EXOC1LA0A1B0GW35 172 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SYNDIG1LA6NDD5 238 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 A8MXQ7 604 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PI4K2BG5E9Z4 385 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 M0QYV0 167 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 TIMM44O43615 452 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CACNG3O60359 315 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 LUC7L3O95232 432 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 FGF19O95750 216 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SNAI1O95863 264 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 KRT14P02533 472 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SNRPAP09012 282 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SMIM10L2AP0DMW4 78 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SMIM10L2BP0DMW5 78 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CXCL8P10145 99 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 TROVE2P10155 538 aaKnown RBP eCLIP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 RALAP11233 206 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CYBAP13498 195 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PDGFRAP16234 1089 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 ZNF10P21506 573 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 ACHEP22303 614 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 BDNFP23560 247 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 ACAT1P24752 427 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 NPY2RP49146 381 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 NDST2P52849 883 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 LIMK1P53667 647 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CDH6P55285 790 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CBX1P83916 185 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PLD1Q13393 1074 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CDH18Q13634 790 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PRPSAP1Q14558 356 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PTGISQ16647 500 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SHROOM1Q2M3G4 852 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PARP6Q2NL67 630 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PTPN20Q4JDL3 420 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SPANXN3Q5MJ09 141 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 MARCH8Q5T0T0 291 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CST9LP1Q5W188 147 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CES4AQ5XG92 561 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 LYSMD4Q5XG99 296 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SLC24A5Q71RS6 500 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PIGWQ7Z7B1 504 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 TMEM126BQ8IUX1 230 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 UNC45BQ8IWX7 931 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 FBXO16Q8IX29 292 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SIX6OS1Q8N1H7 587 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 LRTM2Q8N967 370 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 Q8NBF4 154 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CCDC197Q8NCU1 140 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PRSS33Q8NF86 280 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 OR7A2PQ8NGA2 310 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 OR5B17Q8NGF7 314 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 URGCPQ8TCY9 931 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 MIPOL1Q8TD10 442 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 DTX3LQ8TDB6 740 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PYROXD1Q8WU10 500 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PDCD6IPQ8WUM4 868 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 TFB1MQ8WVM0 346 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 UBLCP1Q8WVY7 318 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 IFT81Q8WYA0 676 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PIK3R3Q92569 461 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 EEF2KMTQ96G04 330 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SPATA17Q96L03 361 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 C2orf48Q96LS8 159 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CCDC114Q96M63 670 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 GLT1D1Q96MS3 346 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PRICKLE1Q96MT3 831 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SPATA13Q96N96 652 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 ZNF558Q96NG5 402 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 OLFM3Q96PB7 478 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 MCEEQ96PE7 176 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 KLHL5Q96PQ7 755 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 QKIQ96PU8 341 aaKnown RBP eCLIP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CYP2S1Q96SQ9 504 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 PCDHB18PQ96TA0 734 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 NPY6RQ99463 290 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 DDX50Q9BQ39 737 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 C11orf70Q9BRQ4 267 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 CCDC28BQ9BUN5 200 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 LRRC61Q9BV99 259 aa3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 IQCGQ9H095 443 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-204ENST00000459708 SNX25Q9H3E2 840 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms