RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 RNF138Q8WVD3 245 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 SLC35G5Q96KT7 338 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 MS4A4EQ96PG1 132 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 SATB2Q9UPW6 733 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 PCDHGB3Q9Y5G1 929 aa6.13□□□□□ -1.43
USP46-202ENST00000451218 A0A087WUU8 490 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 OR5K4A6NMS3 321 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 FRS3O43559 492 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 BRINP1O60477 761 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 TIAF1O95411 115 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 FMO3P31513 532 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 EPHA4P54764 986 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 MAT1AQ00266 395 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 ID2Q02363 134 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 DBPQ10586 325 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 VASNQ6EMK4 673 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 PODNL1Q6PEZ8 512 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SLCO6A1Q86UG4 719 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ATCAYQ86WG3 371 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CSNK1A1LQ8N752 337 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ZNF441Q8N8Z8 693 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 VPS37AQ8NEZ2 397 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 RNF166Q96A37 237 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 ACTRT3Q9BYD9 372 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CXorf21Q9HAI6 301 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ZCCHC3Q9NUD5 404 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 PTGFRNQ9P2B2 879 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 TESQ9UGI8 421 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 TMEM200CA6NKL6 621 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SDC3O75056 442 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 TSPAN19P0C672 248 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CHI3L1P36222 383 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 RXRGP48443 463 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CDH12P55289 794 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 VSX2P58304 361 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 EXOSC7Q15024 291 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 C14orf28Q4W4Y0 310 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CCNJQ5T5M9 372 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SYT6Q5T7P8 510 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 UBE2UQ5VVX9 321 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 PMS2CLQ68D20 193 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ST13P4Q8IZP2 240 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 ZNF786Q8N393 782 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 TRIML2Q8N7C3 387 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 TTC29Q8NA56 475 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 OR10G2Q8NGC3 310 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SAP25Q8TEE9 199 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ZNF347Q96SE7 839 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 NLNQ9BYT8 704 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 P2RX2Q9UBL9 471 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 A0A1W2PQM1 296 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 GSAPA4D1B5 854 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 C17orf51A8MQB3 221 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 SYT5O00445 386 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 ERAL1O75616 437 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 PRKAR1BP31321 381 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 RORAP35398 523 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 MAP2K4P45985 399 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 HOXC5Q00444 222 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 KCNC4Q03721 635 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 BCDIN3DQ7Z5W3 292 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 ADCK2Q7Z695 626 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 NKAIN4Q8IVV8 208 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 CACTIN-AS1Q8N1I8 211 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 D2HGDHQ8N465 521 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 PIK3R3Q92569 461 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 C12orf43Q96C57 262 aaKnown RBP6.12□□□□□ -1.43
USP46-202ENST00000451218 TUBA1CQ9BQE3 449 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 PINK1Q9BXM7 581 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 PTTG2Q9NZH5 202 aa6.12□□□□□ -1.43
USP46-202ENST00000451218 A0A0G2JPF8 293 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 HNRNPCL2B2RXH8 293 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 HNRNPCL3B7ZW38 293 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 TNFRSF11BO00300 401 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 PIP5K1CO60331 668 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 DKK1O94907 266 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 ONECUT2O95948 504 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 HNRNPCL4P0DMR1 293 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 SOAT1P35610 550 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 XKP51811 444 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 UBXN2BQ14CS0 331 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 SPCS2Q15005 226 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 B3GNT6Q6ZMB0 384 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 FAM92BQ6ZTR7 304 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 PRICKLE2Q7Z3G6 844 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 TAF8Q7Z7C8 310 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 MEX3DQ86XN8 651 aaKnown RBP6.11□□□□□ -1.43
USP46-202ENST00000451218 MCATQ8IVS2 390 aaKnown RBP6.11□□□□□ -1.43
USP46-202ENST00000451218 OR1L3Q8NH93 324 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 BBS10Q8TAM1 723 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 GGHQ92820 318 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 MOAP1Q96BY2 351 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 ZNF501Q96CX3 271 aaPredicted RBP6.11□□□□□ -1.43
USP46-202ENST00000451218 TMUB1Q9BVT8 246 aa6.11□□□□□ -1.43
USP46-202ENST00000451218 YIPF3Q9GZM5 350 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms