RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	PRR35	P0CG20	571 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	UBL4A	P11441	157 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MDH1	P40925	334 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	EIF1	P41567	113 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	CAPZA1	P52907	286 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ACTR3	P61158	418 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	RNF4	P78317	190 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	DMTN	Q08495	405 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	CBFB	Q13951	182 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	DNAL1	Q4LDG9	190 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	KLHL12	Q53G59	568 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	FBXO42	Q6P3S6	717 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SLC22A25	Q6T423	547 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	KLHL17	Q6TDP4	642 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	RNF130	Q86XS8	419 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ZNF781	Q8N8C0	355 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	PDPR	Q8NCN5	879 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	RNF145	Q96MT1	663 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	LMF1	Q96S06	567 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	RBM24	Q9BX46	236 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	CCDC90B	Q9GZT6	254 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ZFP64	Q9NPA5	681 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	UBAP1	Q9NZ09	502 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	TNFRSF10D	Q9UBN6	386 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	PCTP	Q9UKL6	214 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	NOSIP	Q9Y314	301 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544		A6NLC8	198 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	BCKDHA	P12694	445 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	DDC	P20711	480 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	UQCRC2	P22695	453 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	TSFM	P43897	325 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	GSS	P48637	474 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	FLOT2	Q14254	428 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	PTGR1	Q14914	329 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SPANXN4	Q5MJ08	99 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SLC30A6	Q6NXT4	461 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	KCTD8	Q6ZWB6	473 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MICU2	Q8IYU8	434 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	PHF12	Q96QT6	1004 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	UGT2B28	Q9BY64	529 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	KLHL31	Q9H511	634 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	FKRP	Q9H9S5	495 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	TPT1P8	Q9HAU6	139 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	TMBIM4	Q9HC24	238 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MED11	Q9P086	117 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ADAM29	Q9UKF5	820 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	IFT52	Q9Y366	437 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MAGED1	Q9Y5V3	778 aa	Predicted RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	COL4A6	Q14031	1691 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SAGE2P	A6NJ88	616 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544		B8ZZF3	427 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	NUDT17	P0C025	328 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SOX3	P41225	446 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SLC6A8	P48029	635 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	RPS26	P62854	115 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MRPS15	P82914	257 aa	Known RBP	7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	CDK6	Q00534	326 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MYBPC1	Q00872	1141 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	SPIB	Q01892	262 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	MFSD13A	Q14CX5	517 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	NKPD1	Q17RQ9	610 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	C1QL3	Q5VWW1	255 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	CYS1	Q717R9	158 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ANKRD37	Q7Z713	158 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	PIP4P1	Q86T03	277 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	NEK7	Q8TDX7	302 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ASF1B	Q9NVP2	202 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	AP4B1	Q9Y6B7	739 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544	ALPK2	Q86TB3	2170 aa		7.87	□□□□□ -1.15
HCG18-238	ENST00000449544		K7ENP7	123 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	BCKDK	O14874	412 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	ATP5H	O75947	161 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	CYB5A	P00167	134 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	ZNF23	P17027	643 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	CLN3	Q13286	438 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	TRMT5	Q32P41	509 aa	Known RBP	7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	INO80C	Q6PI98	192 aa	Predicted RBP	7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	FRMD7	Q6ZUT3	714 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	THAP5	Q7Z6K1	395 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	HMGN2P46	Q86SG4	172 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	RNF175	Q8N4F7	328 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	APIP	Q96GX9	242 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	FBXL20	Q96IG2	436 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	ITPA	Q9BY32	194 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	EPB41L4B	Q9H329	900 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	OR51I1	Q9H343	314 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544		Q9H521	79 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	CENPM	Q9NSP4	180 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	FAIM	Q9NVQ4	179 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	QPCTL	Q9NXS2	382 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	PCDHGA6	Q9Y5G7	932 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	TMEM233	B4DJY2	109 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	PROC	P04070	461 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	HMGN2	P05204	90 aa	Known RBP	7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	PGR	P06401	933 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	ZFP36L2	P47974	494 aa	Known RBP	7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	HLCS	P50747	726 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	EMP3	P54852	163 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	UGT2B15	P54855	530 aa		7.86	□□□□□ -1.15
HCG18-238	ENST00000449544	SCARB2	Q14108	478 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms