RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GPR107Q5VW38 600 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 GTF2IRD2BQ6EKJ0 949 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 OLIG3Q7RTU3 272 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 GTF2IRD2Q86UP8 949 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 C11orf74Q86VG3 221 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 COMTD1Q86VU5 262 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 GALNT12Q8IXK2 581 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 C7orf57Q8NEG2 295 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 RAB2BQ8WUD1 216 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 APH1BQ8WW43 257 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 SAP130Q9H0E3 1048 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 PRTFDC1Q9NRG1 225 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 ENAMQ9NRM1 1142 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 UCKL1Q9NWZ5 548 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 RNF215Q9Y6U7 377 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 ZNF99A8MXY4 864 aaPredicted RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 GNSP15586 552 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 GLB1P16278 677 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 ALDH4A1P30038 563 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 SOX18P35713 384 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 ARRB1P49407 418 aaPredicted RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 GFERP55789 205 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 POU6F2P78424 691 aaPredicted RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 TARDBPQ13148 414 aaKnown RBP eCLIP14.63□□□□□ -0.077e-7■■■■□ 23
SNX13-204ENST00000444712 PODNL1Q6PEZ8 512 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 FCGR1BQ92637 280 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 RORBQ92753 470 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 HOXB13Q92826 284 aaPredicted RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 C12orf43Q96C57 262 aaKnown RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 RBM18Q96H35 190 aaKnown RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 LHPPQ9H008 270 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 QRSL1Q9H0R6 528 aaKnown RBP14.63□□□□□ -0.07
SNX13-204ENST00000444712 HCN3Q9P1Z3 774 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 MKLN1Q9UL63 735 aa14.63□□□□□ -0.07
SNX13-204ENST00000444712 IGHV5-51A0A0C4DH38 117 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 AGAP5A6NIR3 686 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 TTC36A6NLP5 189 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 ZNF749O43361 778 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 FCMRO60667 390 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 RPS4Y1P22090 263 aaKnown RBP14.62□□□□□ -0.07
SNX13-204ENST00000444712 MAP3K8P41279 467 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 FNTBP49356 437 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 ARL4DP49703 201 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 HSD17B7P56937 341 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 ZNF155Q12901 538 aaPredicted RBP14.62□□□□□ -0.07
SNX13-204ENST00000444712 Q6ZPB1 254 aaPredicted RBP14.62□□□□□ -0.07
SNX13-204ENST00000444712 WDR53Q7Z5U6 358 aaPredicted RBP14.62□□□□□ -0.07
SNX13-204ENST00000444712 RANBP3LQ86VV4 465 aaPredicted RBP14.62□□□□□ -0.07
SNX13-204ENST00000444712 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 OR4K5Q8NGD3 323 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 GPR151Q8TDV0 419 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 MVB12AQ96EY5 273 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 BCL7BQ9BQE9 202 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 WFDC6Q9BQY6 131 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 ERVK-18Q9QC07 812 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 NDOR1Q9UHB4 597 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 CDC14AQ9UNH5 594 aa14.62□□□□□ -0.07
SNX13-204ENST00000444712 IGHV1OR21-1A0A087WYE8 117 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 KIAA0513O60268 411 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 CYP7B1O75881 506 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 NKX2-2O95096 273 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 OR5F1O95221 314 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 GABRB1P18505 474 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 GALNSP34059 522 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 GSSP48637 474 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 EMX1Q04741 257 aaPredicted RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 NR1D2Q14995 579 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 AP1ARQ63HQ0 302 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 C1orf94Q6P1W5 598 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 KMT5CQ86Y97 462 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 TRUB1Q8WWH5 349 aaKnown RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 SGCDQ92629 289 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 RIT1Q92963 219 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 MMABQ96EY8 250 aaPredicted RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 PEX11GQ96HA9 241 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 Q96MT0 163 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 DGAT2Q96PD7 388 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 KRCC1Q9NPI7 259 aaPredicted RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 MAN2C1Q9NTJ4 1040 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 CLN6Q9NWW5 311 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 REV1Q9UBZ9 1251 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 PSORS1C1Q9UIG5 152 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 PCDHGA10Q9Y5H3 936 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 TNRC6BQ9UPQ9 1833 aaKnown RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 A0A1B0GVT2 93 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 CLCA1A8K7I4 914 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 H3BMQ9 156 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 HRO43593 1189 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 ZIC2O95409 532 aaPredicted RBP14.61□□□□□ -0.07
SNX13-204ENST00000444712 CTSBP07858 339 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 CT62P0C5K7 136 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 HSD11B2P80365 405 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 SERTAD2Q14140 314 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 SLX4IPQ5VYV7 408 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 LYSMD4Q5XG99 296 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 LAIR1Q6GTX8 287 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 CASP12Q6UXS9 341 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 PLEKHM3Q6ZWE6 761 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 RRM2BQ7LG56 351 aa14.61□□□□□ -0.07
SNX13-204ENST00000444712 MORN4Q8NDC4 146 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms