RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PLEKHA1Q9HB21 404 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 UCKL1Q9NWZ5 548 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 BOKQ9UMX3 212 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 TFECO14948 347 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 IL12AP29459 219 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC6A8P48029 635 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 FGD2Q7Z6J4 655 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 PROKR1Q8TCW9 393 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 IP6K3Q96PC2 410 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 ASB6Q9NWX5 421 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 UPB1Q9UBR1 384 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 LOC105369274A0A096LPK9 316 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 LOC102723532A0A0G2JNH3 316 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 ARNTLO00327 626 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 PPM1DO15297 605 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 CH25HO95992 272 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 SSR4P51571 173 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF100Q8IYN0 542 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 OR4N4Q8N0Y3 316 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 STT3BQ8TCJ2 826 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 TM4SF18Q96CE8 201 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 PIP5K1AQ99755 562 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 RPH3AQ9Y2J0 694 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 PLPP1O14494 284 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 MYL9P24844 172 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 GDF1P27539 372 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 WDR53Q7Z5U6 358 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 VDAC3Q9Y277 283 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC22A7Q9Y694 548 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 IGHV1OR21-1A0A087WYE8 117 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CIB4A0PJX0 185 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 IDSB3KWA1 339 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 RGS10O43665 173 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 MAOAP21397 527 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 PON3Q15166 354 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 EXT1Q16394 746 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SGTBQ96EQ0 304 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 TAAR9Q96RI9 348 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 VAPAQ9P0L0 249 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 DAPP1Q9UN19 280 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 KCNK5O95279 499 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 LIM2P55344 173 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 HBA1P69905 142 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 GPR107Q5VW38 600 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 MEIOBQ8N635 442 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 OR51A7Q8NH64 312 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF578Q96N58 590 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 IL4I1Q96RQ9 567 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NANSQ9NR45 359 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC35A3Q9Y2D2 325 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NCOR1O75376 2440 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 DSCR3O14972 297 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 UBL4AP11441 157 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CAPGP40121 348 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 CHTF18Q8WVB6 975 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 OR10A5Q9H207 317 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SERHLQ9NQF3 203 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NPIPA5A0A0B4J1W7 369 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NPIPA7E9PJI5 369 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 UBFD1O14562 309 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 SOX14O95416 240 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NPIPA8P0DM63 369 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 RHCEP18577 417 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 GABREP78334 506 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 PUM1Q14671 1186 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■□□□□ 10.5
SMARCA4-204ENST00000444061 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 RPS26P11Q5JNZ5 115 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 C6orf52Q5T4I8 152 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 NAXDQ8IW45 347 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 ABHD11Q8NFV4 315 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 OSTF1Q92882 214 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 LOXL4Q96JB6 756 aa13.23□□□□□ -0.29
SMARCA4-204ENST00000444061 PDLIM1O00151 329 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 FURINP09958 794 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 RBPJQ06330 500 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 CEACAM7Q14002 265 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TLR1Q15399 786 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 IQCCQ4KMZ1 466 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TCEAL6Q6IPX3 200 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 TCEAL3Q969E4 200 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC46A1Q96NT5 459 aa13.22□□□□□ -0.29
SMARCA4-204ENST00000444061 HIST1H2AAQ96QV6 131 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms