RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 ZNF730Q6ZMV8 503 aa14.99□□□□□ -0.01
SHQ1-202ENST00000444040 SLC16A11Q8NCK7 471 aa14.99□□□□□ -0.01
SHQ1-202ENST00000444040 OR7G2Q8NG99 324 aa14.99□□□□□ -0.01
SHQ1-202ENST00000444040 NELL2Q99435 816 aa14.99□□□□□ -0.01
SHQ1-202ENST00000444040 SLC13A4Q9UKG4 626 aa14.99□□□□□ -0.01
SHQ1-202ENST00000444040 IQCMA0A1B0GVH7 501 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 KDM4EB2RXH2 506 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 H3BQ06 376 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 RGS5O15539 181 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MSL3P1P0C860 447 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ZNF888P0CJ79 500 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 AK4P27144 223 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 RPS15AP62244 130 aaKnown RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 PSPHP78330 225 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 HOXC5Q00444 222 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 LARS2Q15031 903 aaKnown RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 CARTPTQ16568 116 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MINDY4Q4G0A6 757 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ATAD3BQ5T9A4 648 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 C16orf62Q7Z3J2 963 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 NKAIN4Q8IVV8 208 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 LAX1Q8IWV1 398 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 GALNT6Q8NCL4 622 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ANKK1Q8NFD2 765 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 OR52P1PQ8NH57 321 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SLC25A46Q96AG3 418 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ELSPBP1Q96BH3 223 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ZNF624Q9P2J8 865 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MUTYHQ9UIF7 546 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 TBC1D24Q9ULP9 559 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 NTNG1Q9Y2I2 539 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 YBX2Q9Y2T7 364 aaKnown RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SF3B6Q9Y3B4 125 aaKnown RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SPIN1Q9Y657 262 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 STK25O00506 426 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SSX4O60224 188 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 AVPR1BP47901 424 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MFSD12Q6NUT3 480 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 FBXO42Q6P3S6 717 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 FRRS1Q6ZNA5 592 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MTSS1LQ765P7 747 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ASPGQ86U10 573 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 FLVCR1-AS1Q8TAF5 88 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 NT5CQ8TCD5 201 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ADAMTS15Q8TE58 950 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 OR1E3Q8WZA6 343 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 OR2A14Q96R47 310 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 GABRG3Q99928 467 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 KCMF1Q9P0J7 381 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 CDRT1O95170 752 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 IL1AP01583 271 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 CCNYL3P0C7X3 344 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MYL12AP19105 171 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 MTNR1AP48039 350 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 TPBGQ13641 420 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 TCEA2Q15560 299 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ZNF79Q15937 498 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 NCCRP1Q6ZVX7 275 aaPredicted RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 SIMC1Q8NDZ2 872 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 CHAC2Q8WUX2 184 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 TMEM203Q969S6 136 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 TPK1Q9H3S4 243 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 ISYNA1Q9NPH2 558 aa14.98□□□□□ -0.01
SHQ1-202ENST00000444040 YARS2Q9Y2Z4 477 aaKnown RBP14.98□□□□□ -0.01
SHQ1-202ENST00000444040 IRGMA1A4Y4 181 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 KLF4O43474 513 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 LIMS3P0CW19 117 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 LIMS4P0CW20 117 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 SMIM10L1P0DMW3 83 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 EN2P19622 333 aaPredicted RBP14.97□□□□□ -0.01
SHQ1-202ENST00000444040 NTSR1P30989 418 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 SOX18P35713 384 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 CLDN2P57739 230 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 TNFRSF17Q02223 184 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 DECR1Q16698 335 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 FAM214AQ32MH5 1076 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 PLK5Q496M5 336 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 ZMAT1Q5H9K5 638 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 CLEC12AQ5QGZ9 265 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 C9orf50Q5SZB4 431 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 CDC73Q6P1J9 531 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 LRRC25Q8N386 305 aaPredicted RBP14.97□□□□□ -0.01
SHQ1-202ENST00000444040 ZNF485Q8NCK3 441 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 PIGXQ8TBF5 258 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 ACOT11Q8WXI4 607 aaPredicted RBP14.97□□□□□ -0.01
SHQ1-202ENST00000444040 TM4SF19Q96DZ7 209 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 SMIM10Q96HG1 83 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 SLC38A2Q96QD8 506 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 IL20Q9NYY1 176 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 UNC80Q8N2C7 3258 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 A0A1W2PQF6 199 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 DUXAA6NLW8 204 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 SNTNA6NMZ2 147 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 LRRTM2O43300 516 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 COL9A1P20849 921 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 FPR3P25089 353 aa14.97□□□□□ -0.01
SHQ1-202ENST00000444040 NDUFS1P28331 727 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms