RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 CACNA1CQ13936 2221 aa18.89■□□□□ 0.61
VIL1-204ENST00000440053 PHF3Q92576 2039 aaKnown RBP18.89■□□□□ 0.61
VIL1-204ENST00000440053 PKDREJQ9NTG1 2253 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 CHEK2O96017 543 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 BPGMP07738 259 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 EFNA1P20827 205 aaPredicted RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 ELAVL4P26378 380 aaKnown RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 IL12BP29460 328 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 KRTAP10-9P60411 292 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 ZNF844Q08AG5 666 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 HSPB3Q12988 150 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 KRT71Q3SY84 523 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 RNF165Q6ZSG1 346 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 GDF7Q7Z4P5 450 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 OR2L13Q8N349 312 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 MREGQ8N565 214 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 TNIP2Q8NFZ5 429 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 ABTB1Q969K4 478 aaPredicted RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 WDYHV1Q96HA8 205 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 REEP4Q9H6H4 257 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 ZNF395Q9H8N7 513 aaPredicted RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 EML4Q9HC35 981 aaKnown RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 DDX18Q9NVP1 670 aaKnown RBP18.88■□□□□ 0.61
VIL1-204ENST00000440053 SH3BP4Q9P0V3 963 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 ABCA12Q86UK0 2595 aa18.88■□□□□ 0.61
VIL1-204ENST00000440053 WDR91A4D1P6 747 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 PEX11AO75192 247 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 CBR3O75828 277 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 PSMG1O95456 288 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 HOXD4P09016 255 aaPredicted RBP18.87■□□□□ 0.61
VIL1-204ENST00000440053 BCKDHAP12694 445 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 CYP4B1P13584 511 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 TCEA1P23193 301 aaKnown RBP18.87■□□□□ 0.61
VIL1-204ENST00000440053 KRT20P35900 424 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 ETV4P43268 484 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 PNLIPRP2P54317 469 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 GAS1P54826 345 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 NAXEQ8NCW5 288 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 OR6Y1Q8NGX8 325 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 PKNOX2Q96KN3 472 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 CCT7Q99832 543 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 RTN4RQ9BZR6 473 aa18.87■□□□□ 0.61
VIL1-204ENST00000440053 AHRRA9YTQ3 701 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PDPK1O15530 556 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 COQ9O75208 318 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 EPPINO95925 133 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 NEFHP12036 1026 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 EFR3AQ14156 821 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 ACSF3Q4G176 576 aaPredicted RBP18.86■□□□□ 0.61
VIL1-204ENST00000440053 NHSL2Q5HYW2 709 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PLXDC2Q6UX71 529 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PLCZ1Q86YW0 608 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PPCDCQ96CD2 204 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 TREX2Q9BQ50 279 aaPredicted RBP18.86■□□□□ 0.61
VIL1-204ENST00000440053 PRDM14Q9GZV8 571 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 EQTNQ9NQ60 294 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 CBLCQ9ULV8 474 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PCDHGB3Q9Y5G1 929 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 WIF1Q9Y5W5 379 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 PDZD2O15018 2839 aa18.86■□□□□ 0.61
VIL1-204ENST00000440053 GXYLT2A0PJZ3 443 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 ITM2AO43736 263 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 ABCB7O75027 752 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 LYPLA1O75608 230 aaPredicted RBP18.85■□□□□ 0.61
VIL1-204ENST00000440053 IGFBP2P18065 325 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 MSX1P28360 303 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 RFX3P48380 749 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 STARP49675 285 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 PRKAG1P54619 331 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 SNTB1Q13884 538 aaKnown RBP18.85■□□□□ 0.61
VIL1-204ENST00000440053 RIPPLY2Q5TAB7 128 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 EXOC3L1Q86VI1 746 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 TRIM42Q8IWZ5 723 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 OR14L1PQ8NHC6 308 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 RNF138Q8WVD3 245 aa18.85■□□□□ 0.61
VIL1-204ENST00000440053 CTIFO43310 598 aaKnown RBP18.84■□□□□ 0.61
VIL1-204ENST00000440053 SCO2O43819 266 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 SKAP2O75563 359 aaPredicted RBP18.84■□□□□ 0.61
VIL1-204ENST00000440053 GRK2P25098 689 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 GABRA3P34903 492 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 GPC1P35052 558 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 MANFP55145 182 aaKnown RBP18.84■□□□□ 0.61
VIL1-204ENST00000440053 DLX5P56178 289 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 SRYQ05066 204 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 CYP27C1Q4G0S4 372 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 NUDCD3Q8IVD9 361 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 PIK3R3Q92569 461 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 LURAP1Q96LR2 239 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 TRIB1Q96RU8 372 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 C1orf50Q9BV19 199 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 RAB21Q9UL25 225 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 TACC2O95359 2948 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 ESPNB1AK53 854 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 RGS16O15492 202 aaPredicted RBP18.84■□□□□ 0.61
VIL1-204ENST00000440053 FADS1O60427 444 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 ZIC3O60481 467 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 SLITRK5O94991 958 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 IGKV1D-16P01601 117 aa18.84■□□□□ 0.61
VIL1-204ENST00000440053 AGFG1P52594 562 aaKnown RBP18.84■□□□□ 0.61
VIL1-204ENST00000440053 PDE7AQ13946 482 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms