RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CDH10Q9Y6N8 788 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 URB1O60287 2271 aaKnown RBP14.92□□□□□ -0.02
DHFR-201ENST00000439211 TP53BP1Q12888 1972 aaPredicted RBP14.92□□□□□ -0.02
DHFR-201ENST00000439211 HYKKA2RU49 373 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ACPPP15309 386 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 HSD17B2P37059 387 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 MICAQ29983 383 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 EXOC3L2Q2M3D2 409 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 VASNQ6EMK4 673 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ADNP2Q6IQ32 1131 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 CLDN22Q8N7P3 220 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 WDSUB1Q8N9V3 476 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 OR52N1Q8NH53 320 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ZNF558Q96NG5 402 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 DPH7Q9BTV6 452 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 DOHHQ9BU89 302 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ZFP64Q9NPA5 681 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 CTPS2Q9NRF8 586 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 RPH3AQ9Y2J0 694 aaPredicted RBP14.92□□□□□ -0.02
DHFR-201ENST00000439211 RPL36Q9Y3U8 105 aaKnown RBP14.92□□□□□ -0.02
DHFR-201ENST00000439211 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 TLR4O00206 839 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 TSPAN6O43657 245 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ENTPD6O75354 484 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 SLC16A8O95907 504 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 PRKAR1BP31321 381 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 PRKAG1P54619 331 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 PUM1Q14671 1186 aaKnown RBP eCLIP14.92□□□□□ -0.02
DHFR-201ENST00000439211 MED27Q6P2C8 311 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 C22orf39Q6P5X5 142 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 SSX6Q7RTT6 188 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ZNF527Q8NB42 609 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 ART5Q96L15 291 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 RDH14Q9HBH5 336 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 TVP23BQ9NYZ1 205 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 OR10H1Q9Y4A9 318 aa14.92□□□□□ -0.02
DHFR-201ENST00000439211 TMEM88BA6NKF7 163 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 KLHL18O94889 574 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SERPINA3P01011 423 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ACSL1P33121 698 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 PSMA6P60900 246 aaKnown RBP14.91□□□□□ -0.02
DHFR-201ENST00000439211 TCEANCQ8N8B7 351 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SAMD12Q8N8I0 201 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 NEIL3Q8TAT5 605 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 WDR20Q8TBZ3 569 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 CYB5D2Q8WUJ1 264 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SAMD11Q96NU1 681 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 MNTQ99583 582 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 MTG2Q9H4K7 406 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ZNF69Q9UC07 566 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 C2orf74A8MZ97 194 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 D6RAR5 112 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 INHAP05111 366 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 STX4Q12846 297 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 USF2Q15853 346 aaPredicted RBP14.91□□□□□ -0.02
DHFR-201ENST00000439211 ZNF124Q15973 351 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SSX2Q16385 188 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SLC25A25Q6KCM7 469 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 MAMSTRQ6ZN01 415 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 AQP11Q8NBQ7 271 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 HUS1BQ8NHY5 278 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ASB11Q8WXH4 323 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SORCS1Q8WY21 1168 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 AHCYL2Q96HN2 611 aaKnown RBP14.91□□□□□ -0.02
DHFR-201ENST00000439211 IGSF21Q96ID5 467 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 XKR8Q9H6D3 395 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SLC13A4Q9UKG4 626 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SLC6A5Q9Y345 797 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 TDRD15B5MCY1 1934 aaKnown RBP14.91□□□□□ -0.02
DHFR-201ENST00000439211 ANXA2P2A6NMY6 339 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 E9PI62 339 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 PIP5K1CO60331 668 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 FZD6O60353 706 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 KLK1P06870 262 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 MMP12P39900 470 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 GMFBP60983 142 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 MC1RQ01726 317 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 SLBPQ14493 270 aaKnown RBP eCLIP14.91□□□□□ -0.02
DHFR-201ENST00000439211 C9orf152Q5JTZ5 239 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ZNF783Q6ZMS7 281 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 JAZF1Q86VZ6 243 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ZNF251Q9BRH9 671 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 TSSK6Q9BXA6 273 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 EVA1AQ9H8M9 152 aa14.91□□□□□ -0.02
DHFR-201ENST00000439211 ZNF282Q9UDV7 671 aaPredicted RBP14.91□□□□□ -0.02
DHFR-201ENST00000439211 ST8SIA5O15466 376 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 CSO75390 466 aaKnown RBP14.9□□□□□ -0.02
DHFR-201ENST00000439211 ELFN1P0C7U0 828 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 GABRB1P18505 474 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 MRPL19P49406 292 aaKnown RBP14.9□□□□□ -0.02
DHFR-201ENST00000439211 SRP9P49458 86 aaKnown RBP14.9□□□□□ -0.02
DHFR-201ENST00000439211 CDK6Q00534 326 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 PTGES3Q15185 160 aaKnown RBP14.9□□□□□ -0.02
DHFR-201ENST00000439211 LRIF1Q5T3J3 769 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 SLC8B1Q6J4K2 584 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 CBLL1Q75N03 491 aa14.9□□□□□ -0.02
DHFR-201ENST00000439211 LILRA3Q8N6C8 439 aaPredicted RBP14.9□□□□□ -0.02
DHFR-201ENST00000439211 RNASE11Q8TAA1 199 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms