RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 BIKQ13323 160 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 SNX1Q13596 522 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 MFSD12Q6NUT3 480 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 RINLQ6ZS11 566 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 KRT78Q8N1N4 520 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 C7orf57Q8NEG2 295 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 C1orf54Q8WWF1 131 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 TANKQ92844 425 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 NXNL1Q96CM4 212 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 VPS39Q96JC1 886 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 FOXN4Q96NZ1 517 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 ROGDIQ9GZN7 287 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 CXorf21Q9HAI6 301 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 FBXO34Q9NWN3 711 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 FRRS1LQ9P0K9 344 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 PAK5Q9P286 719 aa10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 PACSIN2Q9UNF0 486 aaPredicted RBP10.9□□□□□ -0.66
SMAD9-IT1-201ENST00000437983 ESYT3A0FGR9 886 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 H3BML4 177 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 H7C417 338 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 ABCD4O14678 606 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 WDR47O94967 919 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SCELO95171 688 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PLGP00747 810 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CSF3P09919 207 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 COL6A2P12110 1019 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 NAGAP17050 411 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CD22P20273 847 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 IL2RGP31785 369 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 HPDP32754 393 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 TNFRSF17Q02223 184 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 P2RY6Q15077 328 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 AP5B1Q2VPB7 878 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 ZNF662Q6ZS27 426 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CCDC89Q8N998 374 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 HSD17B8Q92506 261 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GMPPAQ96IJ6 420 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 BTBD9Q96Q07 612 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 FANCFQ9NPI8 374 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 TAS2R13Q9NYV9 303 aa10.89□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 TGFB1P01137 390 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 TPM3P06753 285 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 ZNF23P17027 643 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 EPHA1P21709 976 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 IL32P24001 234 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GABRB3P28472 473 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SSR2P43308 183 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PDLIM4P50479 330 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 IL2P60568 153 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PLCXD2Q0VAA5 305 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CARTPTQ16568 116 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SGCBQ16585 318 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 IQCCQ4KMZ1 466 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SFRP5Q5T4F7 317 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 RAET1LQ5VY80 246 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GPR180Q86V85 440 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GABRG1Q8N1C3 465 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 MUC15Q8N387 334 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 METTL25Q8N6Q8 603 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 C17orf47Q8NEP4 570 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PELOQ9BRX2 385 aaKnown RBP10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PIMREGQ9BSJ6 248 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 MS4A8Q9BY19 250 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 ITPAQ9BY32 194 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 PRRG4Q9BZD6 226 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 NPAP1Q9NZP6 1156 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 XPR1Q9UBH6 696 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SNX8Q9Y5X2 465 aa10.88□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 OR2M5A3KFT3 312 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 AP3B1O00203 1094 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SMAD9O15198 467 aaKnown RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 EEDO75530 441 aaKnown RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 ENO2P09104 434 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SLC35E2BP0CK96 405 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SLC35E2P0CK97 266 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 FCGR2AP12318 317 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 HK1P19367 917 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 S1PR1P21453 382 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GRK2P25098 689 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GALNSP34059 522 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 DEKP35659 375 aaKnown RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 RBMXP38159 391 aaKnown RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 BUD31P41223 144 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 GIPRP48546 466 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 SPOCK1Q08629 439 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 HSP90AA5PQ58FG0 334 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 FBXO48Q5FWF7 155 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 STK32CQ86UX6 486 aa10.87□□□□□ -0.67
SMAD9-IT1-201ENST00000437983 CCDC25Q86WR0 208 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms