RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 COPZ2Q9P299 210 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 PCDHGA6Q9Y5G7 932 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 TTC3P53804 2025 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 ACTBP60709 375 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 ACTG1P63261 375 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 CSNK2A1P68400 391 aaPredicted RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 TSPYL5Q86VY4 417 aaPredicted RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 VWA5B2Q8N398 1253 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 DPH2Q9BQC3 489 aaPredicted RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 SRA1Q9HD15 236 aaKnown RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 SACM1LQ9NTJ5 587 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 HCFC1R1Q9NWW0 138 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 RNF144AP50876 292 aaPredicted RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 PRAMEF8Q5VWM4 474 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 PRAMEF7Q5VXH5 474 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 MS4A15Q8N5U1 240 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 TOE1Q96GM8 510 aaKnown RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 ZC3H10Q96K80 434 aaKnown RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 ALOXE3Q9BYJ1 711 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 TREM1Q9NP99 234 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 MCTS1Q9ULC4 181 aaKnown RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 ABCG2Q9UNQ0 655 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 DEFA5Q01523 94 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 OGFRL1Q5TC84 451 aaPredicted RBP15.03■□□□□ -0
PTPN13-204ENST00000436978 GALNT11Q8NCW6 608 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 WDR20Q8TBZ3 569 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 CWH43Q9H720 699 aa15.03■□□□□ -0
PTPN13-204ENST00000436978 YKT6O15498 198 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 FMO6PO60774 539 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 EDN1P05305 212 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ART1P52961 327 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ARL6IP1Q15041 203 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 AWAT2Q6E213 333 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 UCKL1Q9NWZ5 548 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ADH7P40394 386 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ZNF140P52738 457 aaPredicted RBP15.02■□□□□ -0
PTPN13-204ENST00000436978 UGT2A3Q6UWM9 527 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 RHBDD1Q8TEB9 315 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 SLC6A7Q99884 636 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 MRI1Q9BV20 369 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 IRF2BPLQ9H1B7 796 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ZNF175Q9Y473 711 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 RGPD4Q7Z3J3 1758 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 IFNA2P01563 188 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 LHCGRP22888 699 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 GJA8P48165 433 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 RGS19P49795 217 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 C6orf141Q5SZD1 244 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 ENPP6Q6UWR7 440 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 Q8N402 240 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 OR5AK2Q8NH90 309 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 RNF215Q9Y6U7 377 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 TRAPPC6BQ86SZ2 158 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 OR4K3Q96R72 315 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 DNAJC15Q9Y5T4 150 aa15.02■□□□□ -0
PTPN13-204ENST00000436978 MICAQ29983 383 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 TRUB1Q8WWH5 349 aaKnown RBP15.02□□□□□ -0.01
PTPN13-204ENST00000436978 FGF13Q92913 245 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 SEC14L5O43304 696 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 MRPS14O60783 128 aaKnown RBP15.02□□□□□ -0.01
PTPN13-204ENST00000436978 RAB41Q5JT25 222 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 EEF1A1P5Q5VTE0 462 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 SERPINA11Q86U17 422 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 OR5B2Q96R09 309 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 MAP3K3Q99759 626 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 NENFQ9UMX5 172 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 SLC6A14Q9UN76 642 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 MYOCOSA0A1B0GUC4 107 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 KIAA0355O15063 1070 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 PRLHRP49683 370 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 HSD17B7P56937 341 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 SPHARQ15513 63 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 TMEM151BQ8IW70 566 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 NAALAD2Q9Y3Q0 740 aa15.02□□□□□ -0.01
PTPN13-204ENST00000436978 TRIM64BA6NI03 449 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CPNE6O95741 557 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 PGM2L1Q6PCE3 622 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 COQ8AQ8NI60 647 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CHFRQ96EP1 664 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF442Q9H7R0 627 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 TRAV6A0A075B6T7 132 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CD8B2A6NJW9 211 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CD8BP10966 210 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 AIMP2Q13155 320 aaKnown RBP15.01□□□□□ -0.01
PTPN13-204ENST00000436978 TUBB3Q13509 450 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 KLBQ86Z14 1044 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 PRDM4Q9UKN5 801 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 FBP2O00757 339 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 IFNA5P01569 189 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 DNASE1L3Q13609 305 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 RGNQ15493 299 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 SCD5Q86SK9 330 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 ARL14Q8N4G2 192 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 OR9A2Q8NGT5 310 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 ACOT13Q9NPJ3 140 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 EEF1E1O43324 174 aaKnown RBP15.01□□□□□ -0.01
PTPN13-204ENST00000436978 TLDC1Q6P9B6 456 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 TMEM205Q6UW68 189 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 OSMP13725 252 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms