RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 COL21A1Q96P44 957 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 TSSK3Q96PN8 268 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 SPOCK3Q9BQ16 436 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 TMEM109Q9BVC6 243 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 PARD6BQ9BYG5 372 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 ROPN1BQ9BZX4 212 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-204ENST00000430682 PRDM14Q9GZV8 571 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 ZNF395Q9H8N7 513 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-204ENST00000430682 ROPN1Q9HAT0 212 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-204ENST00000430682 MIEF1Q9NQG6 463 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 GIMAP4Q9NUV9 329 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 B4GALT7Q9UBV7 327 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 ZDHHC2Q9UIJ5 367 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 FBXL2Q9UKC9 423 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 TRAF6Q9Y4K3 522 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 VPS13CQ709C8 3753 aa11.4□□□□□ -0.58
SMPD4-204ENST00000430682 F8P00451 2351 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 A0A087WV62 115 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 GXYLT2A0PJZ3 443 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 SLC28A1O00337 649 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 PLOD2O00469 737 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 FADS1O60427 444 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 NPHS1O60500 1241 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 BCAS2O75934 225 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 IGKV1D-16P01601 117 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 MSX1P28360 303 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 ZFP36L2P47974 494 aaKnown RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 ZNF844Q08AG5 666 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 IFFO1Q0D2I5 559 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 ZNF155Q12901 538 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 GAB1Q13480 694 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 SNTB1Q13884 538 aaKnown RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 MPP2Q14168 576 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 TOMM20Q15388 145 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 GALNTL6Q49A17 601 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 ACSF3Q4G176 576 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 RNF165Q6ZSG1 346 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 LARP4Q71RC2 724 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 GDF7Q7Z4P5 450 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 HEATR5AQ86XA9 2040 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 LIX1Q8N485 282 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 MREGQ8N565 214 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 RELL2Q8NC24 303 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-204ENST00000430682 TWIST2Q8WVJ9 160 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 LURAP1Q96LR2 239 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 TRMOQ9BU70 441 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 KCNJ16Q9NPI9 418 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 KLRF1Q9NZS2 232 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 ITPR3Q14573 2671 aa11.39□□□□□ -0.59
SMPD4-204ENST00000430682 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 RGS14O43566 566 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 ITM2AO43736 263 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 LYPLA1O75608 230 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 EPPINO95925 133 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 BPGMP07738 259 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 BCKDHAP12694 445 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 CEACAM8P31997 349 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 MAP3K8P41279 467 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 FRKP42685 505 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 STARP49675 285 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 PNLIPRP2P54317 469 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 RPP38P78345 283 aaKnown RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 SNTA1Q13424 505 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 PDE7AQ13946 482 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 XKR7Q5GH72 579 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 NHSL2Q5HYW2 709 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 SH2D4BQ5SQS7 431 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 RIPPLY2Q5TAB7 128 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 APOOLQ6UXV4 268 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 IKBIPQ70UQ0 350 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 DMRTC2Q8IXT2 367 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 CLYBLQ8N0X4 340 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 GIMAP5Q96F15 307 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 METTL2AQ96IZ6 378 aaKnown RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 CCT7Q99832 543 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 G6PC3Q9BUM1 346 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 IQCGQ9H095 443 aaKnown RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 REEP4Q9H6H4 257 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 TAS2R9Q9NYW1 312 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 SENP1Q9P0U3 644 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 CAMK2AQ9UQM7 478 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 WBP11Q9Y2W2 641 aaKnown RBP11.38□□□□□ -0.59
SMPD4-204ENST00000430682 PCDHGB3Q9Y5G1 929 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
SMPD4-204ENST00000430682 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-204ENST00000430682 PDPK1O15530 556 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 ZIC3O60481 467 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 TBX19O60806 448 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 PEX11AO75192 247 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 GABRA1P14867 456 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 TCEA1P23193 301 aaKnown RBP11.37□□□□□ -0.59
SMPD4-204ENST00000430682 GRK2P25098 689 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 ELAVL4P26378 380 aaKnown RBP11.37□□□□□ -0.59
SMPD4-204ENST00000430682 NTSP30990 170 aa11.37□□□□□ -0.59
SMPD4-204ENST00000430682 ZNF136P52737 540 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms