RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 FCER2P06734 321 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MAGEA12P43365 314 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 NTRK2Q16620 822 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 SMPDL3BQ92485 455 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 NKD1Q969G9 470 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 EPYCQ99645 322 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PLXNB2O15031 1838 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TNFRSF10CO14798 259 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MSL3P1P0C860 447 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 HK3P52790 923 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 KCNC4Q03721 635 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 ST3GAL3Q11203 375 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 C16orf78Q8WTQ4 265 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MYEOVQ96EZ4 313 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 LGR4Q9BXB1 951 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MROQ9BYG7 248 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TRIM2Q9C040 744 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 SCAMP2O15127 329 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 YKT6O15498 198 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 BMP4P12644 408 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 GDI2P50395 445 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 SIM1P81133 766 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 MEDAGQ5VYS4 303 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 RNF111Q6ZNA4 994 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 OR13F1Q8NGS4 319 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 NR4A3Q92570 626 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 G6PC3Q9BUM1 346 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 EDARQ9UNE0 448 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 DISC1C4P0D8 188 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TP53I11O14683 189 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PRODHO43272 600 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PCDHGA12O60330 932 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 AHCYP23526 432 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 CASP3P42574 277 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 CRISP1P54107 249 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 GBX1Q14549 363 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 BCL7AQ4VC05 210 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 HENMT1Q5T8I9 393 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TMED4Q7Z7H5 227 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PSD4Q8NDX1 1056 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PEX11GQ96HA9 241 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 SERINC2Q96SA4 455 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
SCAF8-203ENST00000417268 COMMD4Q9H0A8 199 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 PTGES2Q9H7Z7 377 aa12.12□□□□□ -0.47
SCAF8-203ENST00000417268 HMX3A6NHT5 357 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 CHRNB1P11230 501 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 SHC2P98077 582 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 NDUFAF5Q5TEU4 345 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 LHFPL3Q86UP9 236 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 OR2L5Q8NG80 312 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 NETO1Q8TDF5 533 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 APIPQ96GX9 242 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 SIAEQ9HAT2 523 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 DMRT3Q9NQL9 472 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 PCDH17O14917 1159 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 NARSO43776 548 aaKnown RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ITGA10O75578 1167 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 C1orf189Q5VU69 101 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 METTL4Q8N3J2 472 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 PARP16Q8N5Y8 322 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 OR5H6Q8NGV6 325 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 GAL3ST3Q96A11 431 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 LPAR4Q99677 370 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 CST11Q9H112 138 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ZNF639Q9UID6 485 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 RAB2AP61019 212 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 APOFQ13790 326 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 SF3B4Q15427 424 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■□ 22.9
SCAF8-203ENST00000417268 GTDC1Q4AE62 458 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 ULK3Q6PHR2 472 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 C6orf120Q7Z4R8 191 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 OR52E4Q8NGH9 312 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 OR2L8Q8NGY9 312 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 THAP6Q8TBB0 222 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 RPL3LQ92901 407 aaKnown RBP12.11□□□□□ -0.47
SCAF8-203ENST00000417268 TMEM45AQ9NWC5 275 aa12.11□□□□□ -0.47
SCAF8-203ENST00000417268 PCDHB14Q9Y5E9 798 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms