RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LTB4RQ15722 352 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 KYAT1Q16773 422 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SYT16Q17RD7 645 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 LY6KQ17RY6 165 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TECRLQ5HYJ1 363 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 FAM182AQ5T1J6 154 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 DDI2Q5TDH0 399 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 KDM4DQ6B0I6 523 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SLC39A4Q6P5W5 647 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 RTL4Q6ZR62 310 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 FAM183BPQ6ZVS7 135 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 AHSA2Q719I0 299 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TMC8Q8IU68 726 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ZDHHC17Q8IUH5 632 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ZNF557Q8N988 423 aaPredicted RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 DNAAF3Q8N9W5 541 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TTC29Q8NA56 475 aaPredicted RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 CAMKVQ8NCB2 501 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 KLHDC9Q8NEP7 349 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 OR2T12Q8NG77 320 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TCEAL3Q969E4 200 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 FAM162AQ96A26 154 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 COQ8BQ96D53 544 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 NXPE2Q96DL1 559 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 KLHL15Q96M94 604 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 Q96MT0 163 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SORCS2Q96PQ0 1159 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 PEBP4Q96S96 227 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 MXRA8Q9BRK3 442 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 CHCHD6Q9BRQ6 235 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TCEAL7Q9BRU2 100 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TBCDQ9BTW9 1192 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 BEX2Q9BXY8 128 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 PRRG3Q9BZD7 231 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ZNF436Q9C0F3 470 aaPredicted RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 MED28Q9H204 178 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 CLMPQ9H6B4 373 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 UCK1Q9HA47 277 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 CASS4Q9NQ75 786 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 POLE3Q9NRF9 147 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 ABCB8Q9NUT2 735 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 COQ3Q9NZJ6 369 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SPASTQ9UBP0 616 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 TESQ9UGI8 421 aaKnown RBP5.14□□□□□ -1.59
CLK1-202ENST00000409403 PSORS1C1Q9UIG5 152 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 PLCL2Q9UPR0 1127 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 NCKAP1Q9Y2A7 1128 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 SNX8Q9Y5X2 465 aa5.14□□□□□ -1.59
CLK1-202ENST00000409403 PCM1Q15154 2024 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 GLYATL1P3A0A0U1RQE8 302 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 FABP12A6NFH5 140 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZAR1LA6NP61 321 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 MPTX1A8MV57 137 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 J3KTA2 159 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 CRCPO75575 148 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ACTL6BO94805 426 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 TSPAN19P0C672 248 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ACSM4P0C7M7 580 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 DARSP14868 501 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 LHCGRP22888 699 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 YWHAQP27348 245 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PSMB4P28070 264 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 HNF1BP35680 557 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 GSTM5P46439 218 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 CLCNKAP51800 687 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 WDR5P61964 334 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 PPP3R1P63098 170 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RPP38P78345 283 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 IL1RL1Q01638 556 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZNF91Q05481 1191 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 LGALS3BPQ08380 585 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RPA4Q13156 261 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PRKG2Q13237 762 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 GPM6BQ13491 265 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 EXOSC2Q13868 293 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 SEMA3AQ14563 771 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 UGT3A2Q3SY77 523 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 FUT11Q495W5 492 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 GLYR1Q49A26 553 aaPredicted RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 PYCR3Q53H96 274 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PYDC2Q56P42 97 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 XKR9Q5GH70 373 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 FAM76BQ5HYJ3 339 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 TSTD2Q5T7W7 516 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 HES5Q5TA89 166 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 HACD4Q5VWC8 232 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 SAXO2Q658L1 398 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ELP2Q6IA86 826 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 NAPEPLDQ6IQ20 393 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 VWA1Q6PCB0 445 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 CLEC9AQ6UXN8 241 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RASSF6Q6ZTQ3 369 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PGAP1Q75T13 922 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RAB11FIP2Q7L804 512 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 SNX20Q7Z614 316 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ADGRD2Q7Z7M1 963 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 CCDC117Q8IWD4 279 aaPredicted RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 UBALD2Q8IYN6 164 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 NRSN1Q8IZ57 195 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms