RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PRRT4C9JH25 899 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 REM1O75628 298 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 GNRH1P01148 92 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 MMP11P24347 488 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 GDI1P31150 447 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 C1orf61Q13536 156 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 FXNQ16595 210 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 C6orf183Q5T699 404 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PDZD3Q86UT5 571 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SFTPA1Q8IWL2 248 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SLC22A4Q9H015 551 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 TESQ9UGI8 421 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 J3QLW9 94 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 EMC8O43402 210 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF19P17023 458 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SELENBP1Q13228 472 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 WSCD2Q2TBF2 565 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SLC25A24Q6NUK1 477 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 ZC3H14Q6PJT7 736 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 TMIEQ8NEW7 156 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 CDS1Q92903 461 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 KCTD7Q96MP8 289 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 KCNN2Q9H2S1 579 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 DDX31Q9H8H2 851 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 KRCC1Q9NPI7 259 aaPredicted RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 MGAT4AQ9UM21 535 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PPIL1Q9Y3C6 166 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 HTR3EA5X5Y0 456 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM221A6NGB7 291 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 H3BUI4 141 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CBLP22681 906 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ITGB8P26012 769 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 TLX1P31314 330 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RPL4P36578 427 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 P2RY2P41231 377 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 HNRNPFP52597 415 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 REEP5Q00765 189 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SCN1BQ07699 218 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 GPM6BQ13491 265 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZSWIM7Q19AV6 140 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PGBD2Q6P3X8 592 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SLC30A8Q8IWU4 369 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 REM2Q8IYK8 340 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SPERTQ8NA61 448 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 OTUB2Q96DC9 234 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF514Q96K75 400 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SAMD8Q96LT4 415 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 OR7D2Q96RA2 312 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 BRF2Q9HAW0 419 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 TAAR2Q9P1P5 351 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 MBD2Q9UBB5 411 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PLCL2Q9UPR0 1127 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RWDD3Q9Y3V2 267 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PPK0 400 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 C1orf226A1L170 272 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 FOXE1O00358 373 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF24P17028 368 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 BCL6P41182 706 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PPP2CAP67775 309 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 MESP2Q0VG99 397 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 DBPQ10586 325 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 DSG2Q14126 1118 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 IKBIPQ70UQ0 350 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SPRED2Q7Z698 418 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 OR52L1Q8NGH7 329 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 GFM1Q96RP9 751 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 MTIF3Q9H2K0 278 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PIGUQ9H490 435 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RC3H2Q9HBD1 1191 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RPRD1BQ9NQG5 326 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CALML5Q9NZT1 146 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 FTSJ1Q9UET6 329 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SLC7A7Q9UM01 511 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 EXO1Q9UQ84 846 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CFL2Q9Y281 166 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 INSL6Q9Y581 213 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 LOC102723532A0A0G2JNH3 316 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PRG6 482 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 UNC119BA6NIH7 251 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 AGAP14A8MT82 685 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 NUDT19A8MXV4 375 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CACNB4O00305 520 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PLPP1O14494 284 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PRG2P13727 222 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 FUT1P19526 365 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ELAVL4P26378 380 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 HOXD12P35452 270 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ECI1P42126 302 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SMSP52788 366 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 STXBP1P61764 594 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RACK1P63244 317 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SAXO2Q658L1 398 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ARL9Q6T311 187 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CXXC5Q7LFL8 322 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 LIX1LQ8IVB5 337 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 NKAIN4Q8IVV8 208 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 KLHDC8AQ8IYD2 350 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ADGRF3Q8IZF5 1079 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 MRPL43Q8N983 215 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 FAM46AQ96IP4 442 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms