RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TLDC2A0PJX2 215 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 GXYLT2A0PJZ3 443 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 AHRRA9YTQ3 701 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 AZIN1O14977 448 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 LSM1O15116 133 aaKnown RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 CDH16O75309 829 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 SPAG7O75391 227 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 LINC00032P0C843 101 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 GABRA1P14867 456 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 SDC1P18827 310 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 EFNA1P20827 205 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 MASP1P48740 699 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 TMED10P49755 219 aaKnown RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 LHX2P50458 406 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 NCBP2P52298 156 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 AGFG1P52594 562 aaKnown RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 DCAF7P61962 342 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 FOXF2Q12947 444 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 SNTA1Q13424 505 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 PDE7AQ13946 482 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 C6orf163Q5TEZ5 329 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 NSUN5P2Q63ZY6 315 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 RNF165Q6ZSG1 346 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 ZCCHC23Q6ZST2 131 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 LARP4Q71RC2 724 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 ZAR1Q86SH2 424 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 PLCZ1Q86YW0 608 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 TRIM42Q8IWZ5 723 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 FAM9CQ8IZT9 166 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 FADS6Q8N9I5 356 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 OR1J4Q8NGS1 313 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 CLHC1Q8NHS4 586 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 FAM76AQ8TAV0 307 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 ABTB1Q969K4 478 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 CIDECQ96AQ7 238 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 GIMAP5Q96F15 307 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 APOPT1Q96IL0 206 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 C3orf30Q96M34 536 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 FAM111AQ96PZ2 611 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 BBS4Q96RK4 519 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 TUBA1CQ9BQE3 449 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 LRTM1Q9HBL6 345 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 CFL2Q9Y281 166 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 V9GYY5 206 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-205ENST00000394892 CELSR1Q9NYQ6 3014 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 KIAA1549Q9HCM3 1950 aa8.04□□□□□ -1.12
ATG4A-205ENST00000394892 MBD3L4A6NDZ8 208 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 MBD3L3A6NE82 208 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 MBD3L5A6NJ08 208 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 CD8B2A6NJW9 211 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 H0YC42 278 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 SYT5O00445 386 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 AKAP10O43572 662 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TYROBPO43914 113 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TRIM13O60858 407 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 SEC22BO75396 215 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 FGF4P08620 206 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 BCKDHAP12694 445 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 CPN1P15169 458 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 GRK2P25098 689 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 MPIP34949 423 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TIMP3P35625 211 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 FRKP42685 505 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 ETV4P43268 484 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 PNLIPRP2P54317 469 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TPD52P55327 224 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 CLDN18P56856 261 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 MPP2Q14168 576 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 SLC25A35Q3KQZ1 300 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 XKR7Q5GH72 579 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 CFAP157Q5JU67 520 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 EXOC3L1Q86VI1 746 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 SAMD14Q8IZD0 417 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 LIX1Q8N485 282 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 MBD3L2Q8NHZ7 208 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TCP10LQ8TDR4 215 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 NINJ1Q92982 152 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 ZBTB9Q96C00 473 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TSSK3Q96PN8 268 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 NPAS1Q99742 590 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 FOXC2Q99958 501 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 LMF2Q9BU23 707 aaKnown RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 TMUB1Q9BVT8 246 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 LIME1Q9H400 295 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 PPCSQ9HAB8 311 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 SIRT3Q9NTG7 399 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-205ENST00000394892 FBXO34Q9NWN3 711 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 C1orf109Q9NX04 203 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 KLRF1Q9NZS2 232 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 JKAMPQ9P055 326 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 NTMQ9P121 344 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 B4GALT7Q9UBV7 327 aa8.03□□□□□ -1.12
ATG4A-205ENST00000394892 ZDHHC2Q9UIJ5 367 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms