RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 FRG2CA6NGY1 282 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 LRRC14BA6NHZ5 514 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SDR42E2A6NKP2 422 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 PLOD2O00469 737 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 CLOCKO15516 846 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 EMC8O43402 210 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 TCF21O43680 179 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 LIASO43766 372 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SSX4O60224 188 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ZNF500O60304 480 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 MFAP3LO75121 409 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 TNFSF13O75888 250 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 RHOXF2BP0C7M4 288 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 FCGR2AP12318 317 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ALOX15P16050 662 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 FAHP16930 419 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 CERS1P27544 350 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SDHAP31040 664 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 BUD31P41223 144 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 CASP3P42574 277 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SLC6A12P48065 614 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 HNRNPFP52597 415 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 HNRNPH2P55795 449 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 CTBP2P56545 445 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 FBXW4P57775 412 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 RPS3AP61247 264 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 HERVK_113P63132 956 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ERVK-8P63133 956 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SIRPAP78324 504 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ID2Q02363 134 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SCGB2A2Q13296 93 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SNTA1Q13424 505 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SNX1Q13596 522 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 BCL2A1Q16548 175 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 TMEM249Q2WGJ8 235 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 AADACL2Q6P093 401 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 C9orf40Q8IXQ3 194 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ST13P4Q8IZP2 240 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 C3orf56Q8N813 242 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 RDH11Q8TC12 318 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SMAP2Q8WU79 429 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 GFM2Q969S9 779 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 UBE2E3Q969T4 207 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 ERVK-6Q9BXR3 956 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 OPN3Q9H1Y3 402 aaPredicted RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 CNOT10Q9H9A5 744 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 WWOXQ9NZC7 414 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 PHF11Q9UIL8 331 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 DKKL1Q9UK85 242 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 FBXO5Q9UKT4 447 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 EXO1Q9UQ84 846 aaKnown RBP7.09□□□□□ -1.27
CASP4-201ENST00000393150 ERVK-19Q9WJR5 959 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 SLC22A14Q9Y267 594 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 CFL2Q9Y281 166 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 RNF115Q9Y4L5 304 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 FREM3P0C091 2139 aa7.09□□□□□ -1.27
CASP4-201ENST00000393150 FAM234BA2RU67 622 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 KIAA0513O60268 411 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ZNF354AO60765 605 aaPredicted RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 PEPDP12955 493 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 SLC25A16P16260 332 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 NAGAP17050 411 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 PTX3P26022 381 aaPredicted RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 SSR2P43308 183 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 SLCO1A2P46721 670 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 GZMKP49863 264 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 RAP1GDS1P52306 607 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 VLDLRP98155 873 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 FAPQ12884 760 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 KLF1Q13351 362 aaPredicted RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 CAPRIN1Q14444 709 aaKnown RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 RAB35Q15286 201 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 SGCBQ16585 318 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 CR1LQ2VPA4 569 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 TMEM35AQ53FP2 167 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 UBAP2Q5T6F2 1119 aaKnown RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 FAM166AQ6J272 317 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 PPP4R4Q6NUP7 873 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ZNF474Q6S9Z5 364 aaPredicted RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 NUP54Q7Z3B4 507 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 GAS2L3Q86XJ1 694 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 DENND6AQ8IWF6 608 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 RFLNBQ8N5W9 214 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ALG3Q92685 438 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 PPWD1Q96BP3 646 aaKnown RBP7.08□□□□□ -1.28
CASP4-201ENST00000393150 TMCO6Q96DC7 493 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 OR4K3Q96R72 315 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 CSF3RQ99062 836 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 OSBPL11Q9BXB4 747 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 HDHD5Q9BXW7 423 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 NT5DC2Q9H857 520 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 CNTD2Q9H8S5 307 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 PROK2Q9HC23 129 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 CLCF1Q9UBD9 225 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 HEATR5AQ86XA9 2040 aa7.08□□□□□ -1.28
CASP4-201ENST00000393150 ALG1L2C9J202 215 aa7.07□□□□□ -1.28
CASP4-201ENST00000393150 OVOL3O00110 214 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms