RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RIT1Q92963 219 aa18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 PRRC1Q96M27 445 aa18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 TRIM45Q9H8W5 580 aaPredicted RBP18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 FBXO34Q9NWN3 711 aa18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 IFT52Q9Y366 437 aa18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 CLDN16Q9Y5I7 305 aa18.5■□□□□ 0.55
PDLIM5-205ENST00000380180 A8MU76 341 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 H0YIG0 161 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 LAMTOR5O43504 91 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 GABRA3P34903 492 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 EMP3P54852 163 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 CXCR4P61073 352 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 IGLV3-21P80748 117 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 SIGLEC14Q08ET2 396 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 SMN1Q16637 294 aaKnown RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 PODNL1Q6PEZ8 512 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 PEX5LQ8IYB4 626 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 SPARTQ8N0X7 666 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 COX18Q8N8Q8 333 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 GAB3Q8WWW8 586 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF350Q9GZX5 532 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 FSCN3Q9NQT6 498 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 MAN2C1Q9NTJ4 1040 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 CUTCQ9NTM9 273 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 NLGN3Q9NZ94 848 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF232Q9UNY5 417 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 SATB2Q9UPW6 733 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 RNF6Q9Y252 685 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 MAU2Q9Y6X3 613 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ADAMTS20P59510 1910 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 SH3PXD2BA1X283 911 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 STX11O75558 287 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ADAP00813 363 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 MAOAP21397 527 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 EPHA8P29322 1005 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 CSTF1Q05048 431 aaKnown RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 PROX2Q3B8N5 592 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 PLK5Q496M5 336 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 TTLL10Q6ZVT0 673 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 CAPN10Q9HC96 672 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 KLHL28Q9NXS3 571 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 MGAT4BQ9UQ53 548 aa18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF443Q9Y2A4 671 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 MN1Q10571 1320 aaPredicted RBP18.49■□□□□ 0.55
PDLIM5-205ENST00000380180 FER1L5A0AVI2 2057 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 CENPVL1A0A0U1RR11 272 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 AGAP5A6NIR3 686 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 CLDN24A6NM45 220 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 WBP4O75554 376 aaKnown RBP18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 RAB39AQ14964 217 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 PTGES3Q15185 160 aaKnown RBP18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 KANSL1Q7Z3B3 1105 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 MAML2Q8IZL2 1156 aaPredicted RBP18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 NLGN4XQ8N0W4 816 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 D2HGDHQ8N465 521 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 FAM81AQ8TBF8 368 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 APH1BQ8WW43 257 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 PIGKQ92643 395 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 CCDC74AQ96AQ1 378 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 SAP130Q9H0E3 1048 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 SEMA5BQ9P283 1151 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 SUSD2Q9UGT4 822 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 ENOPH1Q9UHY7 261 aa18.48■□□□□ 0.55
PDLIM5-205ENST00000380180 HRKO00198 91 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 COQ9O75208 318 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 FOLR1P15328 257 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 ALAS2P22557 587 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 HSD17B7P56937 341 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 LARS2Q15031 903 aaKnown RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 XAF1Q6GPH4 301 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 PGBD2Q6P3X8 592 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 FIGNL1Q6PIW4 674 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 WDR74Q6RFH5 385 aaPredicted RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF836Q6ZNA1 936 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF619Q8N2I2 560 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 DGAT2Q96PD7 388 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 NODALQ96S42 347 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 NUDT22Q9BRQ3 303 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 FANCEQ9HB96 536 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 REV1Q9UBZ9 1251 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 TPRKBQ9Y3C4 175 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 ZDBF2Q9HCK1 2354 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 A0A1B0GTQ1 180 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 GXYLT2A0PJZ3 443 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 NKX2-2O95096 273 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 CPNE6O95741 557 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 JUNBP17275 347 aaPredicted RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 CHMP24386 653 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 SSTR4P31391 388 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 IDH2P48735 452 aaKnown RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 EMDP50402 254 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 CRISP1P54107 249 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 TAS2R41P59536 307 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 POU6F2P78424 691 aaPredicted RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 HOXC5Q00444 222 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 ZNF155Q12901 538 aaPredicted RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 TARDBPQ13148 414 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 MAPK14Q16539 360 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 PRAMEF17Q5VTA0 474 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms