RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NPBWR1P48145 328 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 PXNP49023 591 aaPredicted RBP7.06□□□□□ -1.28
CDKL5-201ENST00000379989 RAB2AP61019 212 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 VLDLRP98155 873 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 PYY3Q5JQD4 70 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 SLC8B1Q6J4K2 584 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 LRRN1Q6UXK5 716 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 CASP12Q6UXS9 341 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 NPSR1Q6W5P4 371 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 MBOAT1Q6ZNC8 495 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 LHFPL3Q86UP9 236 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 TRIM69Q86WT6 500 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 MSRB3Q8IXL7 192 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 PHACTR4Q8IZ21 702 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 SLC44A3Q8N4M1 653 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 DENND6BQ8NEG7 585 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 OR52K2Q8NGK3 314 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 NLNQ9BYT8 704 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 MAGEH1Q9H213 219 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 CXCL16Q9H2A7 254 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 TMPRSS5Q9H3S3 457 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 ALG9Q9H6U8 611 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 RNF186Q9NXI6 227 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 PIPOXQ9P0Z9 390 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 PLEKHA6Q9Y2H5 1048 aa7.06□□□□□ -1.28
CDKL5-201ENST00000379989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 RFPL4AA6NLU0 287 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 RFPL4AL1F8VTS6 287 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CLDN5O00501 218 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TOX3O15405 576 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 PRAMEF2O60811 474 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 GATBO75879 557 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 GLP2RO95838 553 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 IGF2P01344 180 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TFP02787 698 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 INHAP05111 366 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 PPP3CBP16298 524 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 RAB4AP20338 218 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CSF2RBP32927 897 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 NUTF2P61970 127 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SIM1P81133 766 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CLINT1Q14677 625 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SPHARQ15513 63 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 LIPNQ5VXI9 398 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 RPL13AP3Q6NVV1 102 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TMUB2Q71RG4 321 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 OR6X1Q8NH79 312 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TCTEX1D2Q8WW35 142 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM203Q969S6 136 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 ACTL8Q9H568 366 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 BEX1Q9HBH7 125 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SLC25A37Q9NYZ2 338 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 NTMQ9P121 344 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 ALPK3Q96L96 1907 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 PRRG1O14668 218 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 FZD7O75084 574 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 KHDRBS3O75525 346 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 FGF19O95750 216 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF682O95780 498 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 ATXN1LP0C7T5 689 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 RAC2P15153 192 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 BPIP17213 487 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SLC1A2P43004 574 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SRP9P49458 86 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CCR6P51684 374 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 KRT33BQ14525 404 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CTXN3Q4LDR2 81 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CLLU1OSQ5K130 101 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 GSG1LQ6UXU4 331 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 PRSS58Q8IYP2 241 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 GPR26Q8NDV2 337 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 OR9A2Q8NGT5 310 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 EXT2Q93063 718 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 SLC25A28Q96A46 364 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TBL1YQ9BQ87 522 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 TEX12Q9BXU0 123 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 POLDIP3Q9BY77 421 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CWH43Q9H720 699 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 CNOT2Q9NZN8 540 aaKnown RBP7.05□□□□□ -1.28
CDKL5-201ENST00000379989 NEU3Q9UQ49 428 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 MMACHCQ9Y4U1 282 aa7.05□□□□□ -1.28
CDKL5-201ENST00000379989 I6L893 689 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 GALR3O60755 368 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 HLA-DPA1P20036 260 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 DDTP30046 118 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SDHAP31040 664 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ETV5P41161 510 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 NDUFV1P49821 464 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 UBE2IP63279 158 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 PRR5P85299 388 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms