RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 DUSP6Q16828 381 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 EOGTQ5NDL2 527 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 BCL2L15Q5TBC7 163 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 NKAIN4Q8IVV8 208 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 SETD7Q8WTS6 366 aaKnown RBP16.89■□□□□ 0.3
GNE-201ENST00000377902 PHF21AQ96BD5 680 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 COQ10AQ96MF6 247 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.3
GNE-201ENST00000377902 EQTNQ9NQ60 294 aa16.89■□□□□ 0.3
GNE-201ENST00000377902 TRAV6A0A075B6T7 132 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
GNE-201ENST00000377902 HMGN2P05204 90 aaKnown RBP16.89■□□□□ 0.29
GNE-201ENST00000377902 SYPP08247 313 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 PPP2R1BP30154 601 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 ATP6V1E1P36543 226 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 NDUFAF5Q5TEU4 345 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 KIAA1211LQ6NV74 962 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 LCTLQ6UWM7 567 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 AKAP1Q92667 903 aaKnown RBP eCLIP16.89■□□□□ 0.29
GNE-201ENST00000377902 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
GNE-201ENST00000377902 AICDAQ9GZX7 198 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 MKRN2Q9H000 416 aaKnown RBP16.89■□□□□ 0.29
GNE-201ENST00000377902 OR52A5Q9H2C5 316 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 ZFR2Q9UPR6 939 aaKnown RBP16.89■□□□□ 0.29
GNE-201ENST00000377902 MYO7AQ13402 2215 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 HEATR5BQ9P2D3 2071 aa16.89■□□□□ 0.29
GNE-201ENST00000377902 PGRMC2O15173 223 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 PIP5K1CO60331 668 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 PAPLNO95428 1278 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 HLA-DPB1P04440 258 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 INHAP05111 366 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 SP3Q02447 781 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 MRPL28Q13084 256 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 TEAD2Q15562 447 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 ADCK2Q7Z695 626 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 CCDC116Q8IYX3 515 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 C9orf62Q8N4C0 152 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 SIRT6Q8N6T7 355 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 OR8H1Q8NGG4 311 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 ARMC5Q96C12 935 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 SLC38A2Q96QD8 506 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 TRMT61BQ9BVS5 477 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 KLHL31Q9H511 634 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 POLMQ9NP87 494 aaPredicted RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 KIAA1549LQ6ZVL6 1849 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 LEUTXA8MZ59 168 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 NOS1APO75052 506 aaPredicted RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 TBXA2RP21731 343 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 NNMTP40261 264 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 RNASE12Q5GAN4 147 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 ZNF793Q6ZN11 406 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 POGLUT1Q8NBL1 392 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 CD99L2Q8TCZ2 262 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 PCNPQ8WW12 178 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 SMG7Q92540 1137 aaKnown RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
GNE-201ENST00000377902 RAD51AP1Q96B01 352 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 RHBGQ9H310 441 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 ISYNA1Q9NPH2 558 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 CHST2Q9Y4C5 530 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
GNE-201ENST00000377902 NDUFS4O43181 175 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 HOXB3P14651 431 aaPredicted RBP16.87■□□□□ 0.29
GNE-201ENST00000377902 IFNA8P32881 189 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 OR10A3P58181 314 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 STXBP1P61764 594 aaKnown RBP16.87■□□□□ 0.29
GNE-201ENST00000377902 AADACL4Q5VUY2 407 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 CREB3L2Q70SY1 520 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 NUDT13Q86X67 352 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 OR51G2Q8NGK0 314 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 NACC2Q96BF6 587 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 NUS1Q96E22 293 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 AIF1LQ9BQI0 150 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 EPHX3Q9H6B9 360 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 MED20Q9H944 212 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 SGK494L7N484 410 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 SURF4O15260 269 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 EIF4EP06730 217 aaKnown RBP16.87■□□□□ 0.29
GNE-201ENST00000377902 GSTM3P21266 225 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 OMPP47874 163 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 ADAM15Q13444 863 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 ANKRD54Q6NXT1 300 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 TMEM107Q6UX40 140 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 GHDCQ8N2G8 530 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 OR2L2Q8NH16 312 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 GNPDA2Q8TDQ7 276 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 DNAJA4Q8WW22 397 aaPredicted RBP16.87■□□□□ 0.29
GNE-201ENST00000377902 IMP3Q9NV31 184 aaKnown RBP16.87■□□□□ 0.29
GNE-201ENST00000377902 STMN3Q9NZ72 180 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 NUMA1Q14980 2115 aa16.87■□□□□ 0.29
GNE-201ENST00000377902 CXorf51AA0A1B0GTR3 108 aa16.86■□□□□ 0.29
GNE-201ENST00000377902 SNTNA6NMZ2 147 aa16.86■□□□□ 0.29
GNE-201ENST00000377902 C4orf51C9J302 202 aa16.86■□□□□ 0.29
GNE-201ENST00000377902 SCO1O75880 301 aa16.86■□□□□ 0.29
GNE-201ENST00000377902 FUT1P19526 365 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms