RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 OR1S1Q8NH92 325 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 C9orf43Q8TAL5 461 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SCRN2Q96FV2 425 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 RCC1LQ96I51 464 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HIST1H2AHQ96KK5 128 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF599Q96NL3 588 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OR2M2Q96R28 347 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 NELL2Q99435 816 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HIST1H2AJQ99878 128 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CNPPD1Q9BV87 410 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CDCP1Q9H5V8 836 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OPA3Q9H6K4 179 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 MVB12BQ9H7P6 319 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SPASTQ9UBP0 616 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 UTS2RQ9UKP6 389 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ARL5AQ9Y689 179 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 MYLKQ15746 1914 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 A8MT66 165 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 G3V3Q6 166 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 H3BM21 787 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 AQP7O14520 342 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 KDM4BO94953 1096 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SERPINA1P01009 418 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ENGP17813 658 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CXCL3P19876 107 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ITGB7P26010 798 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 HOXD9P28356 352 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 PBLDP30039 288 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SSTR4P31391 388 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZFP36L2P47974 494 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 PIK3CGP48736 1102 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 NUDT6P53370 316 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 MC2RQ01718 297 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SSX1Q16384 188 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 TSTQ16762 297 aaKnown RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF628Q5EBL2 1059 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 PRAMEF13Q5VWM6 474 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 B3GNTL1Q67FW5 361 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 NAGSQ8N159 534 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 Q8N402 240 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 FTMTQ8N4E7 242 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 CHST14Q8NCH0 376 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 OR52K2Q8NGK3 314 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SH3RF2Q8TEC5 729 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 UBE2FQ969M7 185 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SLC22A18Q96BI1 424 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZPBPQ9BS86 351 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 MAGEH1Q9H213 219 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 SNTG1Q9NSN8 517 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 NPTNQ9Y639 398 aa8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZFP37Q9Y6Q3 630 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 H3BNC9 293 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 GSTA4O15217 222 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
ATG4A-203ENST00000372232 SNAPC5O75971 98 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 GLP2RO95838 553 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 IFNGP01579 166 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 CRYBA1P05813 215 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 RAB4AP20338 218 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 SLC6A1P30531 599 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 SLC11A2P49281 568 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 CDH4P55283 916 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 RPS24P62847 133 aaKnown RBP8.34□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF155Q12901 538 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-203ENST00000372232 UAP1L1Q3KQV9 507 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 PLA1AQ53H76 456 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 LBHQ53QV2 105 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-203ENST00000372232 DDI2Q5TDH0 399 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 CPZQ66K79 652 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 PLBD1Q6P4A8 553 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 MZT2AQ6P582 158 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 METAP1DQ6UB28 335 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-203ENST00000372232 ISCA2Q86U28 154 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 PIM3Q86V86 326 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 SKA3Q8IX90 412 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 CLDN22Q8N7P3 220 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF527Q8NB42 609 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 GPR150Q8NGU9 434 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 METTL6Q8TCB7 284 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 SLC25A46Q96AG3 418 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 ULK4Q96C45 1275 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 PEX11GQ96HA9 241 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 TRIB3Q96RU7 358 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 MGME1Q9BQP7 344 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 KATNB1Q9BVA0 655 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
ATG4A-203ENST00000372232 TCAPO15273 167 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 CD3EAPO15446 510 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 SDC3O75056 442 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 RPP40O75818 363 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 RGS11O94810 467 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 GJB5O95377 273 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 LY86O95711 162 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 EFEMP2O95967 443 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PIRTP0C851 137 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms