RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 KRCC1Q9NPI7 259 aaPredicted RBP13.4□□□□□ -0.26
CD48-201ENST00000368045 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
CD48-201ENST00000368045 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
CD48-201ENST00000368045 IL20Q9NYY1 176 aa13.4□□□□□ -0.26
CD48-201ENST00000368045 SLC17A4Q9Y2C5 497 aa13.4□□□□□ -0.26
CD48-201ENST00000368045 KCNE3Q9Y6H6 103 aa13.4□□□□□ -0.26
CD48-201ENST00000368045 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 CCDC88CQ9P219 2028 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 MEIOCA2RUB1 952 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 SURF4O15260 269 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 KLF4O43474 513 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 AKAP8O43823 692 aaKnown RBP13.39□□□□□ -0.27
CD48-201ENST00000368045 HCN1O60741 890 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 IGHA1P01876 353 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 CSF3P09919 207 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 AZGP1P25311 298 aaKnown RBP13.39□□□□□ -0.27
CD48-201ENST00000368045 CERS1P27544 350 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 MC3RP41968 323 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 NKX2-5P52952 324 aaPredicted RBP13.39□□□□□ -0.27
CD48-201ENST00000368045 ENPP2Q13822 863 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 LRRC32Q14392 662 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 SF3B4Q15427 424 aaKnown RBP eCLIP13.39□□□□□ -0.27
CD48-201ENST00000368045 PGGHGQ32M88 737 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 FAM214AQ32MH5 1076 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 ZNF750Q32MQ0 723 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 ZFP69Q49AA0 526 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 SLC35F1Q5T1Q4 408 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 C18orf63Q68DL7 685 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 ZNF425Q6IV72 752 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 HEPHL1Q6MZM0 1159 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 PLEKHM3Q6ZWE6 761 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 VRK2Q86Y07 508 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 C1QTNF2Q9BXJ5 285 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 TP63Q9H3D4 680 aaPredicted RBP13.39□□□□□ -0.27
CD48-201ENST00000368045 KIR3DX1Q9H7L2 352 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 NLGN3Q9NZ94 848 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 POLHQ9Y253 713 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 KCNK6Q9Y257 313 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 N6AMT1Q9Y5N5 214 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 STON1Q9Y6Q2 735 aa13.39□□□□□ -0.27
CD48-201ENST00000368045 CPSF4LA6NMK7 179 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 KAT7O95251 611 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 HLA-DQB1P01920 261 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 HLA-DPB1P04440 258 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 CEACAM5P06731 702 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 HTR1FP30939 366 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 TGM4P49221 684 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 RGS8P57771 180 aaPredicted RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 ERVK-21P61565 698 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 FABP5Q01469 135 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 SGCGQ13326 291 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 RPE65Q16518 533 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 OR52P1PQ8NH57 321 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 GAL3ST3Q96A11 431 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 FAM46AQ96IP4 442 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 ST6GAL2Q96JF0 529 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 SOSTQ9BQB4 213 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 MTHFD2LQ9H903 347 aaPredicted RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 CNIH4Q9P003 139 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 APOBEC3BQ9UH17 382 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 CLCA2Q9UQC9 943 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 RBMX2Q9Y388 322 aaKnown RBP13.38□□□□□ -0.27
CD48-201ENST00000368045 CDH10Q9Y6N8 788 aa13.38□□□□□ -0.27
CD48-201ENST00000368045 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
CD48-201ENST00000368045 A8MU76 341 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 FAM47E-STBD1D6RA91 191 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 ASGR2P07307 311 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 ALPPL2P10696 532 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 GNSP15586 552 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 PEBP1P30086 187 aaKnown RBP13.37□□□□□ -0.27
CD48-201ENST00000368045 BDH1Q02338 343 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 RUNX3Q13761 415 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 FGL2Q14314 439 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 PYDC2Q56P42 97 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 MZT2AQ6P582 158 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 PSRC1Q6PGN9 363 aaPredicted RBP13.37□□□□□ -0.27
CD48-201ENST00000368045 ZNF620Q6ZNG0 422 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 FBXL6Q8N531 539 aa13.37□□□□□ -0.27
CD48-201ENST00000368045 ARIH2OSQ8N7S6 290 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms